Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0721 ATGAAAGGTTATGAACCAAGGTCAAGTTCCTCTTGTGCAGCCTGCAAGTTTCTGAAAAGAAGATGCATACCAAATTGTATATTCGCACCCTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAAGTTTTCGGAGCAAGTAATGTGAGCAAGATTCTGATTGAAGTTCCGGAGGAACAGAGGGAAGAAACTGTGAATTCTTTGGCTTATGAAGCTGATGCTAGGCTTAAAGATCCTGTTTATGGATGCATAGGTGCTATAGCAATTTTGCAGAGGAAGATGGTTGAACTTCAACACGACCTCGCTATTGCGAAGGATCGCCTCGCTTGTTGCGCTGCTGTTGCTGCTACTGCTGCTGCTACTGCTACGACTCCGAGTACTTCTTCGAATGATTTGATGAATTCTAATGTCAGTTTGCCGCCTTTTCCTGAGTTTTTCTCTTGCAGTGATTTCAATGATAATTTTAGTCACAGTTCGTCGTCTCAGTCGTTTAGTCGAAACGAAACTGTGGATGATTTCTTCCAAATTCCTTATATATTTTGA 552 0.4239 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREETVNSLAYEADARLKDPVYGCIGAIAILQRKMVELQHDLAIAKDRLACCAAVAATAAATATTPSTSSNDLMNSNVSLPPFPEFFSCSDFNDNFSHSSSSQSFSRNETVDDFFQIPYIF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0721 183 Coils Coil 90 110 - -
Psa2g0721 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 176 - -
Psa2g0721 183 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Psa2g0721 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 176 - -
Psa2g0721 183 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0721 Psa-Chr2 43564671 43565836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0721 1 117 AS2 family AT3G11090 77.778 3.85e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g0721 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0721 - - gmx:100305534 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0721 2 43564671 43565836 Psa2g0721 2 43564671 43565836 ECH