Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0719 ATGAATGATCCTAGATCAAAGATGATGATGATGATGATATCTCCAGGTTTATTACCAACAGAATCATTACTAGATTCATTGGTTTTAATCTCCAATGAAGTTAGTTCAATTGAAAATTTTCCATTAGTGCAAATAAAAAATGTATCATCCATGATAAGAAGGATCAAGCTTCTTTCATCATTGTTTGAAGAGATTCAAGAATCCGACACACCGCTTCCGCCTTCGTCGATTCTTTGTTTCACAGAACTCTTTTCCATGATCACAAGAGTGAAGATTCTGATTCAAGAATGCAAAGATAGAAGCTCTCTTTGGAGTCTAGTACAGTTGGAGTTCATTTCGAATCAATTTTTCGCGCTTGTGAAAGAATTCGGAAGAGCTTTTGATATTCTTCCTTTGAATTTGCTTCATGTGACACATGATATAAAGGAGCAGATTGAGCTTTTGCATAGACAAGCTAAGAGAGTTGAAGTTGAATTGTTTATTGATCCTAGAGAAGTTCAAAGAAGAGAAAAGCTTTTGGAAGTAATGTCGAAGAATTGCTTGCAGAACAAGAAAACTAATAAAGGGTTTGTTGATTTTGTGAAAGTGGAAGAGATAATGAGTAGCATTGGTTTGAGAACTTTATCGGATTACGTCGAGGAAATATCGAAGTTAGAGGTTGAAGCGCAGAATCAAGCGGGGACGGGAGGACTACTCGTCGTCTCGAATATAAACAATCTCATGTTGCTCGTTTCGTATACCAAATCAATGGTATTCAGAAACAACGACGACGAATCAGAAGAGTATAAGCCGTTATCTATGTTTCTATACAACAAAACTAAAATACATGATAATGATAATTCTTCATTATCTTCGTCTTCTTCTCGATCGATGATTTCGTCGATGGTTAGTATTCCGGACGAGTTTCGTTGTCCGATTTCGCTAGACCTAATGAGGGATCCTGTGATTGTTTCATCAGGACATACTTATGATCGAATTTCGATTGCGGAATGGATAAACTCGGGTCACCATACTTGTCCTAAAAGTGGACAAAGACTAATTCACACTGCTCTAATACCAAACTATGCATTGAAGAGTCTTGTTCATCAATGGTGCTACGAAAACAATGTCTCGGTGAACGAATCGAAAGAAAACAATAACAGTAGTAGCAAAAGGCACAAGAATGAGAATGCAATTGATCATATTTCAGCAAACAAAGCATCAAAAGATGCTGTCAAGATGACAGCAGAGTTTCTTGTTGGAAAATTAGCAACCGGTTCGACTGATATCCAAAGACAATCCGCGTACGAGATTCGCCTCCTCGCAAAAACTGGTATGGACAACCGACGAATCATAGCCGAGGTAGGCGCGATTCCCTTTCTAGTAACACTTCTAGTCTCCAAAGATTCAAGAATCCAAGAACACGTCGTGACAGCGCTATTCAACCTATCGATTTACGACAATAACAAGATCCTAATCATGGCGGCCGGAGCGATCGACAACATAGTCGAAGTGCTCGAGTCGGGAAAAACAATGGAAGCGCGAGAAAACGCCGCAGCGGCTATATATAGTTTATCAATGATAGATGATTGTAAAGTGCAAATTGGAGCAAGCTCTAAGGCAATACCTGCATTAGTAGGACTATTAAAAGAAGGTACACCAATTGGAAAAAAAGACGCTGCTATTGCATTGTTCAATCTTGCAGTTTATAATCCTAACAAGTTAAGTATAGTTAAAAGTGGAGCAGTTGGTTTACTTGTTGAGTTGTTGATGGATGATAAAGCTGGGATAACCGACGATTCGTTGGCGGTGCTGGCCGTGTTATTAGGCTGTTCTCAAGGGTTGGAAGAGATAAAGAATAGTAAGAGTTTGGTGACAATACTTATTGATCTTTTGAGATTTGGATCAGTGAAAGGGAAGGAAAATTCGATAACCCTTTTGCTTGGATTGTGTAAAGAAGAAGGAGAATTGGTTGCAAGGAGATTGTTGGCAAATCCAAGGAGTATTCCTTCTCTACAAAGTTTGGCTGGTGATGGGTCTTTGAGAGCTAGGAGAAAAGCTGATGCATTGCTTAGGTTGCTTAATAGGTGTTGTTCTCAACCTCATCATTCTTTGTGA 2097 0.3896 MNDPRSKMMMMMISPGLLPTESLLDSLVLISNEVSSIENFPLVQIKNVSSMIRRIKLLSSLFEEIQESDTPLPPSSILCFTELFSMITRVKILIQECKDRSSLWSLVQLEFISNQFFALVKEFGRAFDILPLNLLHVTHDIKEQIELLHRQAKRVEVELFIDPREVQRREKLLEVMSKNCLQNKKTNKGFVDFVKVEEIMSSIGLRTLSDYVEEISKLEVEAQNQAGTGGLLVVSNINNLMLLVSYTKSMVFRNNDDESEEYKPLSMFLYNKTKIHDNDNSSLSSSSSRSMISSMVSIPDEFRCPISLDLMRDPVIVSSGHTYDRISIAEWINSGHHTCPKSGQRLIHTALIPNYALKSLVHQWCYENNVSVNESKENNNSSSKRHKNENAIDHISANKASKDAVKMTAEFLVGKLATGSTDIQRQSAYEIRLLAKTGMDNRRIIAEVGAIPFLVTLLVSKDSRIQEHVVTALFNLSIYDNNKILIMAAGAIDNIVEVLESGKTMEARENAAAAIYSLSMIDDCKVQIGASSKAIPALVGLLKEGTPIGKKDAAIALFNLAVYNPNKLSIVKSGAVGLLVELLMDDKAGITDDSLAVLAVLLGCSQGLEEIKNSKSLVTILIDLLRFGSVKGKENSITLLLGLCKEEGELVARRLLANPRSIPSLQSLAGDGSLRARRKADALLRLLNRCCSQPHHSL* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0719 698 SUPERFAMILY RING/U-box 291 371 - -
Psa2g0719 698 SMART arm_5 563 603 IPR000225 GO:0005515
Psa2g0719 698 SMART arm_5 479 520 IPR000225 GO:0005515
Psa2g0719 698 SMART arm_5 438 478 IPR000225 GO:0005515
Psa2g0719 698 SMART arm_5 522 562 IPR000225 GO:0005515
Psa2g0719 698 SMART arm_5 604 645 IPR000225 GO:0005515
Psa2g0719 698 CDD RING-Ubox_PUB 302 344 IPR045210 -
Psa2g0719 698 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 533 575 IPR000225 GO:0005515
Psa2g0719 698 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 449 491 IPR000225 GO:0005515
Psa2g0719 698 SUPERFAMILY ARM repeat 408 687 IPR016024 -
Psa2g0719 698 PANTHER U BOX DOMAIN-CONTAINING 20 695 - -
Psa2g0719 698 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 20 695 - -
Psa2g0719 698 SMART Ubox_2 301 364 IPR003613 GO:0004842|GO:0016567
Psa2g0719 698 Gene3D - 401 531 IPR011989 -
Psa2g0719 698 Gene3D - 532 692 IPR011989 -
Psa2g0719 698 ProSiteProfiles U-box domain profile. 297 371 IPR003613 GO:0004842|GO:0016567
Psa2g0719 698 Pfam U-box domain 298 368 IPR003613 GO:0004842|GO:0016567
Psa2g0719 698 Pfam Armadillo/beta-catenin-like repeat 440 477 IPR000225 GO:0005515
Psa2g0719 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 373 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0719 Psa-Chr2 43347702 43350332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0719 22 693 U-box Gene Family AT3G46510 37.185 8.09e-126 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0719 - - cam:101513231 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0719 2 43347702 43350332 Psa2g0719 2 43347702 43350332 ECH