Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0717 ATGATCAAGAACATGAATCTTTCTGCAGCCTTTTGGTTTGTATCCGTGTGTTTCTTGTTTCTTAACTTGAGTTTGTGCTGCTATTCTTTGAATGATGAAGGTAATACTCTTTTGAAGTTGAAGGAGAGAATAACCAGTGACCCTTTTGATGCTTTGTCAACATGGGTTGATGATGAAGCTTCTCTTGATCCTTGTCATTGGTTTGGAGTTGAATGCGCAGATAGAGAAGTTGTTGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAACTCTATCACCAGAGCTTATGAACCTTGTTCACATAAAATCTATTATTTTAAGGAACAACTCTTTCTATGGAACCATACCTGAAGAAATTGTAGCCTTAAAAGAATTGGAGATTTTGGATTTAGGATATAACAACTTCAGTGGACATCTAGATGCTAATTTTGAGCATAGTATCTCATCACTAGCAATTCTTTTGCTAGACAACAATGAGCACCTTGCTGGTTTCTCTCCGAAAATCAATGAACTGAAAATGCTTTCTGAGTGTCAAGTAGATGAAAACCAGTTAACCAATGCAGCTAACATGGCGTCTTGTTCAGAAAGATCCATCAAATGGCATGTTCACGAAAACGAAGGTCCTAGGAGCCTGCTGGAACATCACAAACTACATCGTCCTCCTTATCATTACCGTCGTAATCATACTTCGCCTCTCTATAGACCTTCTCCTTCACATTCCCCATCGGTCGCAGCACCACCACCGGTCCCGAGTCCAGACTCTCCTGATCAAAATGCTTCTGATTCTCCAAATCAAAATGCCTTAGATTCTCCGGATCAAAATGCTTCGGATTCTCCTCCTCAAAGCATAGCATCAAAGAAGAATCAAGTGCCTATTTGTGCCGGAGTTATTATCGGCAGTGCTGTGTTTCTTGTTATTTCAACCATTGGTATATATCTTTGTAAAACCAACAAGGTATCTATTGTTAAACCTTGGACTACTGGAATAAGTGGACAGCTTCAGAAAGCACTTGTGACAGGTGTGCCAAAGCTAAAGAGAATAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATCGGTAATTCCCCGATCGGTACATTGTACAAAGGAACTTTATCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCTATGACATTATCCAAGACTTGGACAAAGAATTTAGAAGCTCAGTTCAGGAAGAAGATAGACATGTTATCAAAAGTGAATCACAGGAATTTTGTCAATCTAATTGGATATTGTGAAGAAGAAGAACCTTTCACCAGAATGTTGGTTTTCGAATATGCACCAAATGGGACACTGTTCGAGCATTTACACGTAAAAGAAGCCGAGCATTTGAACTGGGGACCGAGACTTAGAATTGCGACGGGAATGGCTTACTGCCTACAATACATGCATGGACTGGACCCTCCTGTGGCCCTTATCAACCTGAGTTCTTCAACTGTCCATTTAACTGATGATCATGCAGCAAAAATCTCGGATTTGAGTTTCTCCCACGAAAAAGATTCATCTGAAAAGAAACCTGATGGTAGAAAAGACATTGATATAGATATGATGGATTCAACAAGTAGAGCGAGTAATGTTTACAGCTTTGGTGTTTTGTTATTCGAGATAGTAACTGGTCGAATTCCTTATTCGGTTGATAACAGTTCAGCTGAAAACTGGGCATCACATTATCTAAAATGGGACAAACCTCTCGAGGAAATGGTGGATGCAACTCTAGCATCTTACCAAGAAAATCAGGTGGAACGAGTTGCTGAGTTGATAAAAGATTGTGTGGATCCTGATTCGGAGAAGAGACCGAGAATGAATGAAGTGAGTGAGAGATTGAGAGAGATAACGAAAATGTCGCCTGAATTTGTAGTTCCTAAACTTTCTCCACTTTGGTGGGCTGAGCTTGAGATCTCTTCTGCATAA 1941 0.3988 MIKNMNLSAAFWFVSVCFLFLNLSLCCYSLNDEGNTLLKLKERITSDPFDALSTWVDDEASLDPCHWFGVECADREVVVLNLKDLCLEGTLSPELMNLVHIKSIILRNNSFYGTIPEEIVALKELEILDLGYNNFSGHLDANFEHSISSLAILLLDNNEHLAGFSPKINELKMLSECQVDENQLTNAANMASCSERSIKWHVHENEGPRSLLEHHKLHRPPYHYRRNHTSPLYRPSPSHSPSVAAPPPVPSPDSPDQNASDSPNQNALDSPDQNASDSPPQSIASKKNQVPICAGVIIGSAVFLVISTIGIYLCKTNKVSIVKPWTTGISGQLQKALVTGVPKLKRIDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSMTLSKTWTKNLEAQFRKKIDMLSKVNHRNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHVKEAEHLNWGPRLRIATGMAYCLQYMHGLDPPVALINLSSSTVHLTDDHAAKISDLSFSHEKDSSEKKPDGRKDIDIDMMDSTSRASNVYSFGVLLFEIVTGRIPYSVDNSSAENWASHYLKWDKPLEEMVDATLASYQENQVERVAELIKDCVDPDSEKRPRMNEVSERLREITKMSPEFVVPKLSPLWWAELEISSA* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0717 646 Gene3D Transferase(Phosphotransferase) domain 1 437 629 - -
Psa2g0717 646 PANTHER PROTEIN MALE DISCOVERER 2 5 646 - -
Psa2g0717 646 ProSiteProfiles Protein kinase domain profile. 354 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0717 646 PANTHER LRR RECEPTOR-LIKE KINASE 5 646 - -
Psa2g0717 646 MobiDBLite consensus disorder prediction 233 283 - -
Psa2g0717 646 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Psa2g0717 646 SUPERFAMILY Protein kinase-like (PK-like) 340 618 IPR011009 -
Psa2g0717 646 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Psa2g0717 646 MobiDBLite consensus disorder prediction 255 283 - -
Psa2g0717 646 MobiDBLite consensus disorder prediction 240 254 - -
Psa2g0717 646 Pfam Protein tyrosine and serine/threonine kinase 357 618 IPR001245 GO:0004672|GO:0006468
Psa2g0717 646 Gene3D Phosphorylase Kinase; domain 1 328 436 - -
Psa2g0717 646 SUPERFAMILY L domain-like 37 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0717 Psa-Chr2 43292320 43295340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0717 1 618 Receptor kinase-like Gene Family AT5G16000 25.039 4.56e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Psa2g0717 PK_Tyr_Ser-Thr 6.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0717 - - lja:Lj2g3v2794510.1 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0717 2 43292320 43295340 Psa2g0717 2 43292320 43295340 ECH