Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0708 ATGCTCTACTCTTTTGTTTTGTCTTCTAATAACTTCTCTGTTTTTGAAGAAAAAAAAATGGGTGGAAATTCACCATGTGCTTCATGCAAGCTTCTGAGACGAAGATGCGCAAAAGATTGCACCTTTGCTCCTTATTTTCCTTCTCATGAACCCCAAAAGTTTGCCATAGTTCACAAGGTTTTCGGAGCTAGCAACGTTAGCAAAATGTTACAGGAGCTTCCAATTCATCAAAGAGCAGATGCAGTGAGTAGTTTAGTCTATGAAGCAAATGCAAGAGTGAGAGATCCAGTTTATGGCTGTGTTGGAGCAATATCCTATTTACAAAACCAAGTTTCTGAGCTTCAAATGCAGCTTGCAGTTGCACAAGCTGAGATTCTCTGCATCCAGATGCAAAATGAGCAAGTGATTATTCCAAATCCAGAAATTAATCAAGATCAGAAAAACTACTTTACTCAAGATGAACTCACTCAGTTTCTTAATTATGGTTCTTCTTCTAGTAATAATAATAATAATAATGTAGTTTATGATTCTCTTAAGAGAGATAACATTTATGGACATGATATGGTTTCTTGA 573 0.3595 MLYSFVLSSNNFSVFEEKKMGGNSPCASCKLLRRRCAKDCTFAPYFPSHEPQKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQNEQVIIPNPEINQDQKNYFTQDELTQFLNYGSSSSNNNNNNVVYDSLKRDNIYGHDMVS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0708 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 20 181 - -
Psa2g0708 190 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 20 181 - -
Psa2g0708 190 Coils Coil 104 124 - -
Psa2g0708 190 Pfam Lateral organ boundaries (LOB) domain 25 122 IPR004883 -
Psa2g0708 190 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0708 Psa-Chr2 41433648 41435640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0708 22 147 AS2 family AT2G30130 82.171 2.75e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g0708 LOB 6.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0708 - - lang:109360574 284.263