Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0682 ATGGAAACTGATGAAGCCCCTACTGCTGCTGCCGCACCACCTCCTAGCTCCAATGACTGTGATGTTAATATGCAAGATGCTAAGGCAACCGCTGATACCAATGGAGCAATAAATGGCGTGCATGAGACAGGAGACAAGCCTGTGCAAATGGATACTGATGCCAAGGTTAGGGGCATCGCTTTACAAGGGAAAATGGCTTTTTCAGAGACTGAATTTTGTGTTGCAAATAATGTTAGTGACGATGAAAATAAGCTACTACATCTAGTGCAGAAGTTCCTATCGGTTTCAGTGATAGCCGTGAACATAAGGAAGACGTTGTTGCATTGTCAAGCATGGGTATGGATATTTAGTATAATGCTCAGTCAATGCCTTATTCAGGGAGATAATGCAGATTCACAGGATGCCGAAAACAGTTACCATTATGGAGATGATGTGCAAAGGTCTCCAAGGGATGTTTTGTTATCGAATGATTTCAATATGCAGAATGATTCACTTGCTCAGCAGAACCTAATGTCCTGTCCTGTCGCTGGGGACGGATTTACCATCAGTAATTCAAATAATGAATTGATTGAGGATTTGCCCAATGCATTATCTGATATATATTCTCATGGGATGACATCTGAATTACCGGATGGAATAATCGCTGAATTTACAGCAATCTCAGGACAAGCCTTTAAAGCAAAGATATGCCCTTCGCCAGTATTGATGCCTGTACCTAGTGCTGGACCATTAGGACCCTTTGTTCCTGCTCCACCAAAAGTTGCAATGCAGATGCTAAGAGAGCAAGGAGGACCATCTTCATATGATGCCTCTGGAAGAACAATGCTGTCTGGACCTCATATGGGTGGACAGGCACCAATAATTGCTGTAAATCGGACATTTAGACCAGACCCTCAGAAGATGCAAAGTTATCATGATTTGGATGCTCCAGATGCCGAGGTCACTATGATAGACTATCGGAGTTTGGCAACTTATAGTCATTTTAGTGATGCAGTTCATCTGGATATCACATGCAGAGCTAACCAGTATAGAGTGCCATTTGTTCCTTTTACTAGAGTAAACAGTCATGGAACTATCGAGGAGTTTGAATCATTTTGGAATTCTATCCTTGATAAATATGAGCTTAGAAGCAATGATTGGCTTCAGTCCCTTGTCCTGGCCATCTCCCTGGATTGCTTGACAACTACTGTCGTGAATTGTTTAGCAACCATTGCAAGGAAAAGACCACAACACTATGGTATTATCCTCTCAGCTCTGCTTGATTTTGATCCAAATGTTCAAACAATAAAAGGATGTCATCTTGTCAGTATTCAGTACTCTTTAAGAACAACTTTTTTGGATTTTCTAAGATGCACTTTTTCTCCAATAATAGAGTCAAGAGAAAAACTGATAAGGAGCCTGCGAGCTATGAGTGCAGGGGGTGCTGCTGATCAGGTGATTCGTCAAGTAGACAAAATGATTAAAAGCGGTGATCGATTTGCCCGTGATGCTCGAGTTGGCAAGGATAACAAACCATTAACTCAGTTGCTAGTTTTTGGGGAATTATGTAGGAAAAGACCAGTTCCTAGTGATAATGAACAATTGGCCAATGGTCACGAGGCCATTCCTGAGCGAGATTTTAGCTCCATTAACGGAGTGTCACCTAATGTCCCTGTTCTAGAAAATGAACTAACTTCCGTGGAACAAATGATTGCCGCTATTGTTGCTTTGATTTCTGAAGGAGAAAGAGGCGCCAAATCTCTTGAAATACTTATTTCACAGATTCATCCTGATCTGTTGGCTGACAATCATAGTTCTGAAGCTGATGTTCATCTCGTGGAGAGCTTCTCAGCATGTAGCGGTGAGTCTGTGCAAGTGCAACCTCATAAGGTTAATTCTACGTCGAGCACTTCAAAGCCCCCGCGTGATGGAACATATATGCAGGAATTGGATGACTCTACGCAGACTAAGGGAAACTCGGTGTCCAAGCACCGCCAGTCAAAATTGACAGTCAAGCAGAATATGGAGCTATGTCAAGAGGAGATGGAGCTATATATTTGCGTCTTCCCCACAAAGGATACCGTAAAAAATATGGGATCATGCTGTTGA 2088 0.4229 METDEAPTAAAAPPPSSNDCDVNMQDAKATADTNGAINGVHETGDKPVQMDTDAKVRGIALQGKMAFSETEFCVANNVSDDENKLLHLVQKFLSVSVIAVNIRKTLLHCQAWVWIFSIMLSQCLIQGDNADSQDAENSYHYGDDVQRSPRDVLLSNDFNMQNDSLAQQNLMSCPVAGDGFTISNSNNELIEDLPNALSDIYSHGMTSELPDGIIAEFTAISGQAFKAKICPSPVLMPVPSAGPLGPFVPAPPKVAMQMLREQGGPSSYDASGRTMLSGPHMGGQAPIIAVNRTFRPDPQKMQSYHDLDAPDAEVTMIDYRSLATYSHFSDAVHLDITCRANQYRVPFVPFTRVNSHGTIEEFESFWNSILDKYELRSNDWLQSLVLAISLDCLTTTVVNCLATIARKRPQHYGIILSALLDFDPNVQTIKGCHLVSIQYSLRTTFLDFLRCTFSPIIESREKLIRSLRAMSAGGAADQVIRQVDKMIKSGDRFARDARVGKDNKPLTQLLVFGELCRKRPVPSDNEQLANGHEAIPERDFSSINGVSPNVPVLENELTSVEQMIAAIVALISEGERGAKSLEILISQIHPDLLADNHSSEADVHLVESFSACSGESVQVQPHKVNSTSSTSKPPRDGTYMQELDDSTQTKGNSVSKHRQSKLTVKQNMELCQEEMELYICVFPTKDTVKNMGSCC* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0682 695 Gene3D - 371 499 IPR011989 -
Psa2g0682 695 Pfam Symplekin/PTA1 N-terminal 392 479 IPR032460 -
Psa2g0682 695 PANTHER SYMPLEKIN-RELATED 391 646 - -
Psa2g0682 695 MobiDBLite consensus disorder prediction 617 637 - -
Psa2g0682 695 PANTHER SYMPLEKIN-RELATED 391 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0682 Psa-Chr2 38222997 38226868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0682 217 322 C2H2 Transcription Factor Family AT2G27100 52.212 2.71e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0682 K06100 - gmx:100789876 302.367