Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0677 ATGTCAAATTCAACTTCCCAATTTGCCACCCCTCTTCTACCACAAACCACCGAGGATCCACAAGAAAACGCAGTTCCACAAAATGGATCAGTCTCCGGGGCAGTCTTCAACATCTCAACCACCATGGTCGGTGCCGGAATCATGTCGATTCCGGCGACTATGAAAGTCCTCGGCATAATTCCGGGGCTAATTGTGATCGTCTTGGTGGCAGTTATAACGGATTTAACGGTTGAGTTTATGTTGAGGTGTACAAGCTCCGGTAAAGCAGTTACATATGCGGGTATGGTGGGTGAGTCGTTCGGTTCGGTTGGTTCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTTATCGTCTATCTCATTATTCTTGGAGATGTTCTATGCGGAAATGAGTACGAAGGTACCATACATTTAGGTATTCTACAACAATGGTTTGGCATTCACTGGTGGACATGTCGCACTTTTGCTCTTCTTGTCGTCGCACTTGTCATAATGCTCCCCCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCGTTATCGATCCTTTTAGCGTTGGTTTTTGTTGTAATATGCTCCTCGATGGCGGTTACTGCATTATCGTCCGGGAAAACTCAGTCGGTGAGAATATTTCCTGATTTCTCTCAAGTTACTGCCCTTGATCTTTTCACCACTGTCCCTATTTTTGTAACAGGCTTTGGATTCCATGTCAATGTTCATCCCATTAGAGCAGAGCTTGTAAAACCGACAGACATGAGTTCCGCCGTGCGAATTTCGCTGTTAATCTCGGTTGCCATTTACTTTGCTATTGGATTCTTTGGATACCTATTGTTCGGTGACTCCATCATGCCAGACGTGTTGGTAAACTTCGACCAGAACTCCGATTCAAGTTTCGGTCGATGGCTAGACAACATCATTCGGCTAAGCTACGCCCTCCATCTCGCACTTGTATTCCCCATCATGAACTATTCTTTGAGGGCCAATATAGATGAACTATTATTCTCAAAGAAAAATAAGCCTCCTTTGGCTTTGGACACTCCAAGATTTGTGTCACTCACTCTTGTTTTGTTCGCATTCATCTATTTGGTGGCTGTGGCTATTCCAAATGTTTGGTACTTTTTTCAGTTCTTGGGATCTACTACAGTTGTTTGCCTCTCATTCATCTTCCCTGCTGCAATCATACTAAGGGATATGCACGGTATATCAAAAACAAGAGATAAAGTAATAGCAACAGTGGTGATTATTTTGGCCGTTGGGACAAGTGGGATTGCTATATGGACCAATTTGAATGGTTCAAGTGCTGATTAA 1329 0.4319 MSNSTSQFATPLLPQTTEDPQENAVPQNGSVSGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVIVLVAVITDLTVEFMLRCTSSGKAVTYAGMVGESFGSVGSLAVKICVITTNLGVLIVYLIILGDVLCGNEYEGTIHLGILQQWFGIHWWTCRTFALLVVALVIMLPLVMLRRVDSLKYSSALSILLALVFVVICSSMAVTALSSGKTQSVRIFPDFSQVTALDLFTTVPIFVTGFGFHVNVHPIRAELVKPTDMSSAVRISLLISVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSDSSFGRWLDNIIRLSYALHLALVFPIMNYSLRANIDELLFSKKNKPPLALDTPRFVSLTLVLFAFIYLVAVAIPNVWYFFQFLGSTTVVCLSFIFPAAIILRDMHGISKTRDKVIATVVIILAVGTSGIAIWTNLNGSSAD* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0677 442 MobiDBLite consensus disorder prediction 1 24 - -
Psa2g0677 442 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 8 440 - -
Psa2g0677 442 Pfam Transmembrane amino acid transporter protein 28 427 IPR013057 -
Psa2g0677 442 PANTHER AMINO ACID TRANSPORTER 8 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0677 Psa-Chr2 38082307 38085994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0677 5 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 51.708 9.25e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0677 - - gmx:100794031 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0677 2 38082307 38085994 Psa2g0677 2 38082307 38085994 ECH