Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0641 ATGGCTTCGATTTGTTCTAGCATGAGTAGAAATTTGATTGTTGGTTTTTCTCTTTTGGTTCTTGTGTTAATGGGAAGTGCTAATGCTTCTCTTTCGAAAGATTATTACTATAGTTCATGTCCAAGACTCTTCGAAACTGTGAAGTGTGCGGTTGAGTCCGCCATATCAAAAGAGACTCGCATGGGTGCTTCGCTTCTGCGTTTGTTCTTCCACGATTGCTTTGTTAATCTTGGAGGTCCAAGTTGGGATGTGAAACTTGGAAGAAGAGACGCAAGAACGGCTAGTCAATCGGCTGCAAACAATGGCATCCCGGCACCAACCTCAAGCCTCAATCAACTCATCTCAAGATATAATGCTCTTGGCCTTTCCGCAAAGGATTTGGTCGCATTGTCTGGTGGTCACACAATTGGACAAGCGAGATGCACTACATTTAGGGGCCACATTTACAACGACACCGACATAGACACTTCCTTTGCTCGCGCAAGGCAATCCGGCTGCCCTAAGACATCCGGGTCGGGAGACAATAACTTGGCGCCCCTCGATCTCGCGACACCAACTTCCTTCGACAATCATTACTTCAAGAATCTTGTTGATATTAAGGGACTACTCCACTCTGACCAAGAACTCTTCAATGGTGGATCCACTGATTCCATAGTGCATGAATATAGCACGAATTCAAACTCTTTTTTCTCTGATTTCGTCGACGCCATGATCAAGATGGGAGACATTAGTCCCCTAACTGGTTCAAATGGTGAGATAAGGAAGAATTGCAGGAGTGTGAATTAA 786 0.4478 MASICSSMSRNLIVGFSLLVLVLMGSANASLSKDYYYSSCPRLFETVKCAVESAISKETRMGASLLRLFFHDCFVNLGGPSWDVKLGRRDARTASQSAANNGIPAPTSSLNQLISRYNALGLSAKDLVALSGGHTIGQARCTTFRGHIYNDTDIDTSFARARQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDIKGLLHSDQELFNGGSTDSIVHEYSTNSNSFFSDFVDAMIKMGDISPLTGSNGEIRKNCRSVN* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0641 261 Gene3D - 77 261 - -
Psa2g0641 261 PANTHER PEROXIDASE 72-RELATED 77 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PANTHER PEROXIDASE 72-RELATED 18 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 ProSiteProfiles Plant heme peroxidase family profile. 43 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PANTHER PEROXIDASE 77 261 - -
Psa2g0641 261 PANTHER PEROXIDASE 18 76 - -
Psa2g0641 261 Gene3D - 31 76 - -
Psa2g0641 261 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Psa2g0641 261 PRINTS Plant peroxidase signature 46 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PRINTS Plant peroxidase signature 195 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 PRINTS Plant peroxidase signature 235 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 SUPERFAMILY Heme-dependent peroxidases 31 261 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g0641 261 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Psa2g0641 261 Gene3D Peroxidase, domain 2 104 240 - -
Psa2g0641 261 CDD secretory_peroxidase 31 260 IPR033905 GO:0004601|GO:0042744
Psa2g0641 261 Pfam Peroxidase 76 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0641 Psa-Chr2 33355516 33357119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0641 43 261 Peroxidase AT5G05340 63.927 4.20e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0641 K00430 - gmx:100803637 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1547 5 121566986 121568135 Psa2g0641 2 33355516 33357119 ECH
Psa2g0641 2 33355516 33357119 Psa2g0641 2 33355516 33357119 ECH