Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0639 ATGAATAAAAGTTTCCTTACTTTCTTCTTTCTTTTCCTCTTTGCATTCTTTTTCTTTGCCACCTTAGTTTTTGGAGCCACTCTCTCAGAAGATGAAGTGGAAGCTCTTAAAGATATTGCTAAGACACTTGGAAAGAAGAATTGGGATTTCAGTGTAGATCCATGTAGTGGACAAAAAAATTGGACATCTTCTGTTCAAGTAAAAGGGAGTGAAAATGCTGTCACATGCAATTGTACCTATGTCAATGCCACTGTTTGTCATGTCACTAACATACTTTTGAAAAGTCAAAATCTCCGCGGTACTCTTCCAGCAGAATTGGTCAAGTTGCCTTATCTTCAAGAATTTGACGTTTCCCGCAATTATTTAAACGGTACAATTCCTAAAGAATGGGGCTCCACGAATCTCTTTAACATAAGTCTCCTTGGAAATCGATTAACTGGTTCAATACCAACAGCTATAACAAACATATCCACTCTACAAAGTTTGGTATTAGAATCCAATCAATTTTCTGGAAATCTTCCTCCTGGGTTTGAGAAACTTACCCAAATTCAAAGATTGTTACTCTCTTCCAACAATTTCAATGGAGAATTACCTGCTGCATTGGCCAAACTCACCACATTACAAGATATTCGACTTGGAGACAATCAATTCACCGGGAAGATACCCGATTTTATTCGAAGCTGGACAAGTCTCAAAAAACTAGTGATTGAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCAGTTTTGGAAAAATTAAATGACTTGAGAATCAGTGATTTAAATGGATTTGAACATTCAACTTTTCCTCAACTTAGTAATATGACATTGAAAACATTGATTCTAAGGAATTGCAACATCAATGGAACACTACCTCCGTATCTTGGGACGATGACTAGTCTAAAAAACTTAGATCTCAGCTTTAACAAATTGAGTGGACCAATTCCAAATGACTATGATCCCCTAAGAAAAGTTGATTACATATATTTAACTGGAAACCTTCTCACTGGACCAGTTCCTTCATGGACACAGAAAGCTGATAACATAGATATTTCATACAATAACTTCAGCCAAAGCCAAGGGAGTCAGACATGTCAAGATGGAAATGTGAACCTGTTTTCTAGTTCTTCGACCCACAATGACTCAGGAAAGGTTTCTTGTTTGACAAGCTTTGTCTGTCCTAAAACGTCGTATGCTCTACGTATAAACTGTGGTGGAAAGCCGGTAACAGTGAATGGAAGCTCATATGATGATGATGGAGATGCAGCAGGACCAGCTAGATTCCACCAGAGTGGAACAAAGAATTGGGCATTTAGCACCACCGGTAACTTCATGGATAATGACGGTGGAGACTATTATACATGGTCGAATAAATCTGCGCTTTCTATGGCCAATGCTGAACTATTCATGACTGCACGAGTTTCTCCCACGTCTCTTACTTATTACGGATTTTGCCTGGGAAACGGAAACTACACAGTTAATCTACATTTTGCCGAAATCATGTTTACCGATGATCAAACTTATAACAGCCTAGGAAGACGTGTTTTCGATATCTATATTCAGGGAAAACTAGTACAAAAGGACTTCAATATTGCAAAAAAAGCCGGAGGAATTGGTAAGGCGGTAACAATACCATTCACCGCTGTTGTCGCGAATAGTACTTTGGAGATTCGCTTGTATTGGGCGGGAAAAGGGACAACTAGTATACCATTTAGATCGGTATACGGTCCTCTTATATCCGCTATATCTGTTGAATCCGATTTTCCACCTCCTCCTGAAAATGGAAGCAGCAGCATATCTACAGGAGCTGTGATCGGAATCGTGGCTGCAGCAGCCATTGTTATCATTCTCTTAGTTTGTATACTTCGGTGGAAAGGCTGTTTTGGAAAGAAAAGCTCTTTAGAAAAAGAGGTAAAGGGTTTAGACCTACAAATGAGTTTATTTAACCTAAGACAAGTCAAAGGAGCAACAAATAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGGTTTGGTCCAGTATACAAGGGATGTCTATCAGACGGAACATTGATAGCAGTCAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGCGAGTTTTTAAACGAAATTGGCATGATTTCGGCTTTGCAGCACCCTAATCTTGTTAAACTCTATGGATGTTGTGTGGAGGGAGATCAGTTAATGCTAATATATGAATATTTGGAAAATAATAGTCTTGCTCGCGCTTTATTCGGGACTCAAGAACAGCAAATAAGATTGGATTGGCCAACAAGATACAAGATTTGTGTCGGTATTGCTAGAGGTTTAGCATATCTTCATGAAGAATCAAGATTGAAAGTTGTTCACAGAGACATTAAAGCAACCAATGTTTTGCTTGATAAAGATTTGAATCCGAAGATATCTGATTTTGGTTTGGCGAAGCTTGATGAAGAAGAGAACACTCACATTAGCACTCGAATAGCAGGAACATACGGATATATGGCTCCAGAATATGCTATGCATGGTTATTTGACCGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATCTTACACGGTAGTAACAACACCACTCTTCGACAAAAAGAAGAAGCATTCCATCTTCTTGATTGGGCACATGTCTTGAAAGAGGAAGGTAATTTACTAGAGCTAGTAGATAAAAGATTGGGATCAAATTTCAAGAAAGAAGAAGCAATGGTGATGATAAATGTGGCCCTGTTATGCACAAATGTGACATCATCACTTAGGCCTGCAATGTCTTCAGTGGTAAGCATGCTGGAAGGTAGAATTGAAATTGAAGAACTGGTTTTAGAGTCGAGTGAGGTATTGGACGAGAAGAAAATGGAAGCAATGCGAAAATATTATCAAGATCATAGTATATCAATGGAAGGGCCATGGACTGCTACAACTTCTTCTTCAGTAGCCACTGATCTTTATCCTGTACAACCAGATTCTTCTTACTTGGAGAAAAGAGTTTGA 3000 0.3863 MNKSFLTFFFLFLFAFFFFATLVFGATLSEDEVEALKDIAKTLGKKNWDFSVDPCSGQKNWTSSVQVKGSENAVTCNCTYVNATVCHVTNILLKSQNLRGTLPAELVKLPYLQEFDVSRNYLNGTIPKEWGSTNLFNISLLGNRLTGSIPTAITNISTLQSLVLESNQFSGNLPPGFEKLTQIQRLLLSSNNFNGELPAALAKLTTLQDIRLGDNQFTGKIPDFIRSWTSLKKLVIEGSGLSGPIPSGISVLEKLNDLRISDLNGFEHSTFPQLSNMTLKTLILRNCNINGTLPPYLGTMTSLKNLDLSFNKLSGPIPNDYDPLRKVDYIYLTGNLLTGPVPSWTQKADNIDISYNNFSQSQGSQTCQDGNVNLFSSSSTHNDSGKVSCLTSFVCPKTSYALRINCGGKPVTVNGSSYDDDGDAAGPARFHQSGTKNWAFSTTGNFMDNDGGDYYTWSNKSALSMANAELFMTARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYNSLGRRVFDIYIQGKLVQKDFNIAKKAGGIGKAVTIPFTAVVANSTLEIRLYWAGKGTTSIPFRSVYGPLISAISVESDFPPPPENGSSSISTGAVIGIVAAAAIVIILLVCILRWKGCFGKKSSLEKEVKGLDLQMSLFNLRQVKGATNNFDISNKIGEGGFGPVYKGCLSDGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPNLVKLYGCCVEGDQLMLIYEYLENNSLARALFGTQEQQIRLDWPTRYKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEILHGSNNTTLRQKEEAFHLLDWAHVLKEEGNLLELVDKRLGSNFKKEEAMVMINVALLCTNVTSSLRPAMSSVVSMLEGRIEIEELVLESSEVLDEKKMEAMRKYYQDHSISMEGPWTATTSSSVATDLYPVQPDSSYLEKRV* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0639 999 Gene3D - 397 589 - -
Psa2g0639 999 CDD STKc_IRAK 668 935 - -
Psa2g0639 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 359 - -
Psa2g0639 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 290 - -
Psa2g0639 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 383 952 - -
Psa2g0639 999 Pfam Malectin domain 401 584 IPR021720 -
Psa2g0639 999 Gene3D Transferase(Phosphotransferase) domain 1 738 947 - -
Psa2g0639 999 Gene3D Phosphorylase Kinase; domain 1 629 737 - -
Psa2g0639 999 ProSiteProfiles Protein kinase domain profile. 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0639 999 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Psa2g0639 999 Gene3D Ribonuclease Inhibitor 203 391 IPR032675 -
Psa2g0639 999 SUPERFAMILY L domain-like 84 359 - -
Psa2g0639 999 Pfam Protein tyrosine and serine/threonine kinase 664 931 IPR001245 GO:0004672|GO:0006468
Psa2g0639 999 SUPERFAMILY Protein kinase-like (PK-like) 646 944 IPR011009 -
Psa2g0639 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Psa2g0639 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 383 952 - -
Psa2g0639 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 290 - -
Psa2g0639 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 359 - -
Psa2g0639 999 Gene3D Ribonuclease Inhibitor 31 200 IPR032675 -
Psa2g0639 999 SMART serkin_6 662 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0639 Psa-Chr2 33189483 33198397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0639 26 984 Receptor kinase-like Gene Family AT1G53420 56.966 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa2g0639 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0639 - - gmx:732563 1499.18