Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0638 ATGTCCAGAGAAAGGGGGAGATTTTTTGATGAGATAGGAAAGAAGAAAGAAGGAGATGATACTTTTCAAAAGGGAAGAAGAATGTTAGGTTCTTCTGGAACCCTAAATACAACTACTCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGGTGTGCACAAGAATGTCCTTTTTCTCCATATTTTTCTCCTCATGAGCCTCACAAGTTTGCTTCTGTTCATAAAGTCTTTGGTGCCAGCAATGTCTCAAAGCTGTTATTGGAGGTACCAGAGAATCAGAGAGCAGATGCAGCAAATAGTTTAGTTTATGAAGCAAATGTAAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAGTTATTACTTGGTGAACTTAATGCTATAAGGGAAGAGATACATAAATATAGACTCATGGAAGCTAACATGCATCCTTCTTCAGAACATGTACCAATTGCTAGTACTATGCCAACTTCAACAACACTGCCTATGCTTCCTTCTTCTATTTACTCACAACAGGAGAATCATCCTTCCAATTATAGCTCAATTTCAAGTGATCATATATCTTATTTTGATTAA 600 0.3717 MSRERGRFFDEIGKKKEGDDTFQKGRRMLGSSGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKLLLEVPENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQLLLGELNAIREEIHKYRLMEANMHPSSEHVPIASTMPTSTTLPMLPSSIYSQQENHPSNYSSISSDHISYFD* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0638 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 26 199 - -
Psa2g0638 199 Pfam Lateral organ boundaries (LOB) domain 40 136 IPR004883 -
Psa2g0638 199 MobiDBLite consensus disorder prediction 180 199 - -
Psa2g0638 199 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
Psa2g0638 199 Coils Coil 119 139 - -
Psa2g0638 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0638 Psa-Chr2 33168280 33169598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0638 26 148 AS2 family AT2G40470 84.553 3.71e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa2g0638 LOB 3.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0638 - - gmx:100786324 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0638 2 33168280 33169598 Psa2g0638 2 33168280 33169598 ECH