Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0636 ATGGCTCGAGTGAAAGGCGCACCCCGCGTAGATCGAAACCCGGTTGCCGGACCGAATCCTCCTGCGGCACCGGAAATCCGTTACCGCGGCGTTCGGAAGCGACCATGGGGCCGATACGCGGCGGAGATAAGAGATCCGTGGAAGAAAGCCCGTGTCTGGTTAGGCACTTTTGATTCTGCAATTCAAGCCGCCCGGGCTTACGACGCAGCTGCAATATCCTTCCGCGGTGCCAAAGCCAAGACCAATTTCCCTATCCCTCCTGAGGCTCTTGCGGCTCTGATTCCTCCTCCTCCACCTCCGGTTAACCGTAGGCCTAAACCAGCCGTGCTTACCAAAGCGGACACGGTTTATGTCAATTATCCTACTTCGAGCGGGATGAGTAGTACCGTGGAATCGTTCAGTGGACCTAGGGTTGGTTCTTCTTCAACCTCTAGGGTTCCTGTGTTTGTTCCGATTGTTGCTGCTGAGGGTTATCACAGTGATTGTGATTCTTCTTCATCTGTGGTGGATGATGATGAAGATTGTGTCATCATTTACTCCCCTGTTCGGAAGCCTCAGCCTCGCAATATTGATCTCAATTTGCCTGCTCCGATGAACTACAATGATGAAGAGATCCGCGCCACCGATTTGCATCTCTGA 639 0.5305 MARVKGAPRVDRNPVAGPNPPAAPEIRYRGVRKRPWGRYAAEIRDPWKKARVWLGTFDSAIQAARAYDAAAISFRGAKAKTNFPIPPEALAALIPPPPPPVNRRPKPAVLTKADTVYVNYPTSSGMSSTVESFSGPRVGSSSTSRVPVFVPIVAAEGYHSDCDSSSSVVDDDEDCVIIYSPVRKPQPRNIDLNLPAPMNYNDEEIRATDLHL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0636 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 25 183 - -
Psa2g0636 212 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Psa2g0636 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 25 183 - -
Psa2g0636 212 MobiDBLite consensus disorder prediction 1 22 - -
Psa2g0636 212 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Psa2g0636 212 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0636 Psa-Chr2 32837347 32838826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0636 15 211 AP2-EREBP Transcription Factor Family AT1G50640 51.402 2.56e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa2g0636 AP2 9.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0636 K09286 - gmx:100795557 166.007