Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0616 ATGGCAGCTAACTCCAGAGTGGCTGCTGATCCTTTTGTAACACAAGTCAACAACGGCTTGCAGGAGATTACCGAGGATCCTACAAAGAACTATCAAGTCGTGATTTTCTTTGAACCTGCAAAACACTTCACCAAAATAGATGCTCTCGCTAGTCTGACTGCTGACGACACTCTTGACACTGAAACATCCAGTAGACTCGAACCAGAAACAGTCCAGCCAGTTATACAAAATGCTATGGACATATTCACATCATCTGGAACAGCTCAGGCAACTCACGCACCTGATGTCCAAGAAGGTAGTGGTACAAAAGAAATGGCTCAGCAAGAAAGTTCACAACAAATGGTATCCTCAATCAGTCAGGCTCCTGTTCTTCGTCTTGGCGCCCAGGGACGGGAAATAGATGAACATGGAAATGTTGTTAATATAACTAAGCCAAGCAACCTTAGCACATTAAAGGATGGGTATCGACAAAACAAAGCTCCTGCTACTCCGGCTTCTGCCCCTGCTACTCCAGTTAATGCTAATCTGCAAAATGTTGCTCCTGCATCGCAAATTCAGACTCCTACGCACCAGCCTTCTCAAATTGATGATGCTCCTCCACAATACAATTCAATGATTTTTGAAGCTTTATCAACAATCAGAGATGCCATTGGGTCCGACTTGAGTGCTATTGTTAGCTTCATTGAGCAAAAGCACAACATTCCTCAAAACCATCCTTGTGCATCCATGAAACAGTCCCAGACGTGGCAAACCAAAACCAAACTATAA 768 0.4388 MAANSRVAADPFVTQVNNGLQEITEDPTKNYQVVIFFEPAKHFTKIDALASLTADDTLDTETSSRLEPETVQPVIQNAMDIFTSSGTAQATHAPDVQEGSGTKEMAQQESSQQMVSSISQAPVLRLGAQGREIDEHGNVVNITKPSNLSTLKDGYRQNKAPATPASAPATPVNANLQNVAPASQIQTPTHQPSQIDDAPPQYNSMIFEALSTIRDAIGSDLSAIVSFIEQKHNIPQNHPCASMKQSQTWQTKTKL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0616 255 Gene3D - 196 254 IPR036388 -
Psa2g0616 255 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 198 255 IPR005818 GO:0000786|GO:0003677|GO:0006334
Psa2g0616 255 PANTHER SINGLE MYB HISTONE 4 155 237 IPR044597 GO:0003691
Psa2g0616 255 SUPERFAMILY "Winged helix" DNA-binding domain 200 239 IPR036390 -
Psa2g0616 255 MobiDBLite consensus disorder prediction 87 109 - -
Psa2g0616 255 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 155 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0616 Psa-Chr2 31858368 31860000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0616 200 237 Single Myb Histone (SMH) Gene Family AT1G17520 60.526 4.76e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0616 K09422 K12843 zju:107425232 70.8626