Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0615 ATGACAGCTAACTCCAGTGTGGCTGCTGATCCTTTTGTAACACAAGTCAACAACGGCTTGCAGGAGATTACCGAGGATCCTACAAAGAACTATCAAGTCGTGATTTTCTTTGAACCTGCAAAACACTTCACCAAAATAGATGCTCTCGCTAGTCTGACTGCTGACGACACTCTTGACACTGAAACATCCAGTAGACTCGAACCAGAAACAGTCCAGCCAGTTATACAAAATGCTATGGACATATTCACATCATCTGGAACAGCTCAGGCAGCTCACGCACCTGATGTCCAAGAAGGTAGTGGTACAAAAGAAATGGCTCAGCAAGAAAGTTCACAACAAATGGTATCCTCAATCAGTCAGGCTCCTGTTCTTCGTCTTGGCGCCCAGGGACGGGAAATAGATGAACATGGAAATGTTGTTAATATAACTAAGCCAAGCAACCTTAGCACATTAAAGGATGGGTATCGACAAAACAAAGCTCCTGCTACTCCGGCTTCTGCCCCTGCTACTCCAGTTAATGCTAATCTGCAAAATGTTGCTCCTGCATCGCAAATTCAGACTCCTACGCACCAGCCTTCTCAAATTGATGATGCTCCTCCACAATACAATTCAATGATTTTTGAAGCTTTATCAACAATCAGAGATGCCATTGGGTCCCACTTGAGTGCTATTGTTAGCTTCATTGAGCAAAAGCACAACATTCCTCAAAACCATCCTTGTGCATCCATGAAACAGTCCCAGACGTGGCAAACCAAAACCAAACTATAA 768 0.4388 MTANSSVAADPFVTQVNNGLQEITEDPTKNYQVVIFFEPAKHFTKIDALASLTADDTLDTETSSRLEPETVQPVIQNAMDIFTSSGTAQAAHAPDVQEGSGTKEMAQQESSQQMVSSISQAPVLRLGAQGREIDEHGNVVNITKPSNLSTLKDGYRQNKAPATPASAPATPVNANLQNVAPASQIQTPTHQPSQIDDAPPQYNSMIFEALSTIRDAIGSHLSAIVSFIEQKHNIPQNHPCASMKQSQTWQTKTKL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0615 255 Gene3D - 196 254 IPR036388 -
Psa2g0615 255 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 198 255 IPR005818 GO:0000786|GO:0003677|GO:0006334
Psa2g0615 255 MobiDBLite consensus disorder prediction 86 114 - -
Psa2g0615 255 SUPERFAMILY "Winged helix" DNA-binding domain 200 239 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0615 Psa-Chr2 31837853 31839485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0615 200 237 Single Myb Histone (SMH) Gene Family AT1G17520 57.895 3.93e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0615 - - zju:107425232 68.1662