Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0593 ATGCAACAACAAGTGGCATCAGAAGTTCAACACCACCAACTCAAGAAAAAGAACCAAGAAACACAGATGTGTCGAAAAATCAAACTCAGTATCACTGATCACAACAACCTCAAACTCACAACCACCGTCGATGATGATGATGTTTGTGACAAAATTGACGGCGAGGATCTCTTCATTCCACCTCTCAATTTTTCTATGGTTGATAACGGCATTTTCCGTTCTGGTTTCCCTGAACCTTCCAACTTCTCTTTCCTTCAAACCCTTGGCCTTCGCTCCATCATATATTTGTGCCCTGAACCATATCCAGAAGCTAACATGGAGTTTCTCAAGTCAAATGGAATCAAGCTTTTTCACTTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCGGACGACACTATTCGGGAAGCCCTAAAAGTTCTTCTTGACGTAAAGAACCACCCGGTTATAATTCACTGCAAGCGAGGAAAGCACCGAACAGGTTGTTTAGTCGGATGCTATAGAAAGCTCCAAAAATGGTGCTTGTCGTCTGTTTTCGACGAGTACCAACGGTTTGCAGCTGCGAAAGCTCGAGTTTCGGATCAGAGGTTTGTAGAGTTGTTTGATATTTCAAGCTTGAAGCATTTACCTATACCATTTTCATATTTGAAGAGGTAA 663 0.4208 MQQQVASEVQHHQLKKKNQETQMCRKIKLSITDHNNLKLTTTVDDDDVCDKIDGEDLFIPPLNFSMVDNGIFRSGFPEPSNFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLFHFGIEGHKEPFVNIPDDTIREALKVLLDVKNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSYLKR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0593 220 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 217 IPR020422 GO:0006470|GO:0008138
Psa2g0593 220 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 205 IPR029021 -
Psa2g0593 220 Pfam Tyrosine phosphatase family 59 210 IPR004861 -
Psa2g0593 220 PRINTS Plant and fungal dual specificity phosphatase signature 58 75 IPR020428 GO:0016791
Psa2g0593 220 PRINTS Plant and fungal dual specificity phosphatase signature 95 108 IPR020428 GO:0016791
Psa2g0593 220 PRINTS Plant and fungal dual specificity phosphatase signature 114 128 IPR020428 GO:0016791
Psa2g0593 220 PRINTS Plant and fungal dual specificity phosphatase signature 131 145 IPR020428 GO:0016791
Psa2g0593 220 CDD PFA-DSP_Siw14 57 204 - -
Psa2g0593 220 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Psa2g0593 220 PANTHER TYROSINE-PROTEIN PHOSPHATASE 16 217 - -
Psa2g0593 220 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 16 217 - -
Psa2g0593 220 Gene3D Protein tyrosine phosphatase superfamily 57 207 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0593 Psa-Chr2 29673545 29676943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0593 41 220 Protein tyrosine phosphatase (PTP) family AT4G03960 72.778 3.21e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0593 K18045 - gmx:100814279 362.459