Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0578 ATGACATGGCCAACGTTAATAACACTAACCATGTTTTCTCTCATCTCAAACACAATCTCCCAACAAGACTACGTTAACAACAAACAACTAGATTGTGATAACACATACAACTCAACATCAGGCAACATTTGCAACAGCGTCAATTCATGTCAATCTTACCTCACCTTCATATCAAACCCCCCATACAACACTCTCTCTTCCATTTCCAATCTCCTCAACGCTTCACCTTCCCTCATCTCCCAATCCAACAACATCTCCACCCTCCAAACCATCGCCACCGGCACAATCCTAACCGTCCCCGTTAACTGTTCCTGTTCCGGCAACAACAACTACTACCAACATAACTCTACCTACACTATGAAAACCGTCGGTGAATCCTACTTCGCAGTCGCAAATCTCACCTACGAAGCTCTCACCACGTGTCAAGCTCTTATCGCTCAGAATCCTTACGGTATTAAAAACCTCGTTGTTGGTCTCAACATAACCGTTCCTCTCAGATGTGCTTGTCCCACCAAAAAACAGAGAGATCAAGGAATCAAGTATCTTCTCACCTACTTGGTCTCTAAAGATGAATCAGTTTCTTCAATCGCTGATATTTTCGGTGCCGATCCACAAACCGTTATTGAAGCTAACAAGCTTTCTCCTACTGCTTTTATTTTCTACTTCACACCTCTTTTAGTCCCTCTCAAAAACGAACCACCGAGAAATATTGTCAAACAAGCTTCACCGCCGGAGTCTCCGCCGCCGCCGCCGCCATCGGCGAATCCGGTGGACAGTGGTTCTTCCTCTTCTAAGAAATGGGTCATCGTTGGTGTTGCGGTTGGGGTTGTTGTTTTGCTTTTAGTGGTTCTTGCTCTGTTTTTCCTCTGTTTCTATAAGCGGCAGCGGCGGCAACCGGAACTACCACCACCCGTGGGTAAACCTTTCTCAGATTCCGACAACAAGAAGATTTCAGATACAACCTCCACAACTCAATCTTGGTCTCTTTCTTCGGAGGGGATTCGTTATGCCGTTGACTCGTTGACTCAGTACAAGTTTCAAGATTTACAAAATGCAACCATGTTTTTCAGTGAAGAGAATAAGATTAAAGGTTCTGTTTATAGAGCTTCGTTTAAAGGTGATGCTGCTGCTGTTAAGATTCTGAAAGGTGATGTTTCTTCTGAGATAAACATTTTGAAGAGGATTAACCATGCCAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTACCTTGTTTATGAGTTTGCTCAGAATAACTCTCTTGATGATTGGCTTCACTCTGAGAACAAGAACAAGAACAAGAGTCATGAGAATTTGAATTCTACGTGTTTGAGTTGGTTTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCACTTAATTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAAAATTTGCAAAGTGGTAATATTCTTTTGGACGGGAAATTTAGAGGTAAAGTTTCAAATTTTGGGTTGGCTAGAGTTATGGAGAATGAAGATAATGAAGGGTTTCAATTAACTAGACATGTAATAGGAACTCAAGGTTACATGGCTCCTGAATATATTGAGAATGGTTTGATTACACCAAAGATGGATGTTTTTGCATTTGGTGTTGTGATTTTGGAGCTTCTTACTGGAAGAGAAGTTGTTGGTGGTGACAAGAATAATGGTTTGTTGAGAGATCAGCTTTTATCTTCAACTGTGAATGAGGTTCTTGAAGGGGAAAATGATAGGGAGAAGCTTAGAGGTTTCATGGATCCAAATTTGAGAGATGAATACCCTTTGGATCTTGCATATTCAATGGCTGAGATTGCCAAAAGATGTGTTGCTCGTGATCTAAACTCAAGACCAAATGTTTCAGAGGTTTTCATGGTTCTGTCTAAGATTCAATCCTCTACATTAGACTGGGATCCATCGTCTAGATCTGTTAGCCAAGTTTCTGATAGCAGATAG 1977 0.4112 MTWPTLITLTMFSLISNTISQQDYVNNKQLDCDNTYNSTSGNICNSVNSCQSYLTFISNPPYNTLSSISNLLNASPSLISQSNNISTLQTIATGTILTVPVNCSCSGNNNYYQHNSTYTMKTVGESYFAVANLTYEALTTCQALIAQNPYGIKNLVVGLNITVPLRCACPTKKQRDQGIKYLLTYLVSKDESVSSIADIFGADPQTVIEANKLSPTAFIFYFTPLLVPLKNEPPRNIVKQASPPESPPPPPPSANPVDSGSSSSKKWVIVGVAVGVVVLLLVVLALFFLCFYKRQRRQPELPPPVGKPFSDSDNKKISDTTSTTQSWSLSSEGIRYAVDSLTQYKFQDLQNATMFFSEENKIKGSVYRASFKGDAAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFAQNNSLDDWLHSENKNKNKSHENLNSTCLSWFQRVQIAHDVADALNYLHNYANPPHVHKNLQSGNILLDGKFRGKVSNFGLARVMENEDNEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLTGREVVGGDKNNGLLRDQLLSSTVNEVLEGENDREKLRGFMDPNLRDEYPLDLAYSMAEIAKRCVARDLNSRPNVSEVFMVLSKIQSSTLDWDPSSRSVSQVSDSR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0578 658 Pfam LysM domain 185 228 IPR018392 -
Psa2g0578 658 ProSiteProfiles Protein kinase domain profile. 352 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0578 658 SUPERFAMILY Protein kinase-like (PK-like) 335 631 IPR011009 -
Psa2g0578 658 Pfam Protein kinase domain 383 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0578 658 PANTHER PROTEIN LYK5 11 651 - -
Psa2g0578 658 MobiDBLite consensus disorder prediction 302 324 - -
Psa2g0578 658 Gene3D Phosphorylase Kinase; domain 1 316 419 - -
Psa2g0578 658 Gene3D Transferase(Phosphotransferase) domain 1 420 651 - -
Psa2g0578 658 ProSiteProfiles LysM domain profile. 183 227 IPR018392 -
Psa2g0578 658 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0578 Psa-Chr2 28932000 28934871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0578 9 647 Receptor kinase-like Gene Family AT2G33580 53.577 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa2g0578 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0578 - - gmx:100818534 825.469