Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0572 ATGGTTTCTAGGGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTGTTACTAACTCTCATGCTCTAAGTGATACCTCGATTGTAATCGATGCATCGAAGTATATCGAAAATCTAAAGGAAAAGGTAGAAAGACTAAATGAAGAAATTGCTTCTGCAGAAAGTTCAAGTGTTCATAATCCCTTGCCTATGATTACGGTGGAAACCCTAGAAAAAGGATTTCTTATAAATGTTTTTTCAGCAAAAAGCAGCCAAGGAATGCTTGTTTCAATACTTGAAGCCATTGAAGAGATGAGACTTACAGTTCTGGAAGCTAGGGTTTCTTGTACGGACAATTTTCGATTCCAAGCTGTTGGAGGAGAGAATGAAGAACAAGGTGAAACCATTGATGCACAAGCTGTGAAACAAGCTGTAGGACAAGCAATAAAAAATTGGAGTGAAAGTGAAAGTAATGATCAAGTGTAA 477 0.3836 MVSREQKRAALHEKLQLLRSVTNSHALSDTSIVIDASKYIENLKEKVERLNEEIASAESSSVHNPLPMITVETLEKGFLINVFSAKSSQGMLVSILEAIEEMRLTVLEARVSCTDNFRFQAVGGENEEQGETIDAQAVKQAVGQAIKNWSESESNDQV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0572 158 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 155 - -
Psa2g0572 158 Coils Coil 33 60 - -
Psa2g0572 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0572 Psa-Chr2 28447237 28449398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0572 11 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.167 1.42e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0572 - - gmx:100306253 245.743