Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0566 ATGAAACTCAAGAATGGGTTACTGTTGTTCTTTATGTTTCTGGATTGTATTTTTTTCAAAGTGGAATCCAAGTGTGTAATAGGGTGTGATATAGCTTTAGCTTCCTACTATGTAATGCCTTTAGTTGAACTCTTAAATATAACAACCTTTATGCAATCAAAGCTTGTTACCAATTCTTCTGAGGTTATAGTAAGGTACAACAGAGACATTGTATTCAGTAATGATAATCTTTTTTCCTATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGTGAATTTCTTGGGCATGTGTTTGAATACACAGCAAATGAAGGAGATACTTATGATTTAATTGCAAATACCTATTATGCAAGCTTAACAACTGTTGAGGTTTTGAAAAAGTTCAACAGCTATGATCCAAATCATATACCTGCTAAGGCTAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGTCAGATTTCAAAAGACTATGGGCTGTTTATCACTTATCCACTTAGGCCTAGGGATACTCTTGAGAAGATTGCAAGCCATTCTAAACTTGATGAAGGGGTGATACAAAGTTACAACTTGGGTGTCAATTTCAGCAAAGGCAGCGGGATAGTGTTCTTTCCGGGAAGAGATAAAAATGGAGAATATGTTCCTTTATATCCTAGAACAGGTCTTGGTAAGGGTGCAGCTGCTGGTATATCCATAGCTGGAATATTTGCACTTCTGTTATTTGTTATCTGCATATATATCAAGTACTTCCAAAAGAAGGAAGAAGAGAAAACTAAACTTCCACAAATTTCTACGGCGCTTTCAGCTCAAGATGCCTCGGGTAGTGGAGAGTACGAAACTTCGGGATCCAGTGGGCATGGTACCGGTAGTACTGCTGGCCTTACAGGAATTATGGTGGCAAAGTCAACTGAGTTTTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTAGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGTACTCAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCGTCGACAGAATTTCTTTGCGAGTTGCAAGTCTTAACACATGTTCATCACTTGAATCTGGTGAGGTTGATTGGATATTGCGTTGAGGGGTCGCTTTTCCTTGTCTATGAACATATTGACAATGGAAACTTGGGTCAATATTTGCATGGTAAAGATAAAGAGCCATTACCATGGTCTAGTAGAGTCCAAATTGCTCTAGATTCAGCACGAGGCCTTGAATACATTCATGAACATACCGTGCCTGTGTATATCCATCGCGATGTAAAATCAGCAAACATATTGATAGACAAAAACTTGCGCGGAAAGGTTGCAGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCGAAAATAGACGTATATGCTTTTGGAGTTGTTCTTTATGAACTGATATCTGCAAAGAATGCTGTTCTGAAGACAGGTGAAGAATCTGTTGCTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAAAAGCACTTAATCAGATTGATCCTTCAGAAGCTCTTCGCAAATTGGTGGATCCTAGGCTTAAAGAAAACTATCCAATTGATTCTGTTTTAAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGATAATCCACTACTACGCCCAAGTATGAGATCTTTAGTTGTTGATCTTATGACACTTTCATCACCATTTGAAGATTGTGATGATGACACTTCCTATGAAAATCAAACTCTCATAAATCTATTATACAATAGAGACATATTATCCAATCGTGCTAATATCTTTTCCTATTTTAGAGTCAACGTTCCATTCCCATGTGACTGTATTGGAGGTGAATTCTTGGGACATGTGTTTGAATACACAGCAAATGAAAGAGATACTTATGATTTGATTGCAAATTCTTATTATGCAAGTTTGACTTCAGTTCAAGTTTTGCAAAAGTTCAATAGTTATCATCCAAATCATATACCTGCTAAAGCTAAGGTTAATGTCACTGTGAATTGTTCTTGTGGGAATAGCCAGATTTCAAAGGATTATGGCTTGTTTATTACTTATCCGTTAAGGTCTACGGATTCTCTTGAAAAGATTGCGAACGCGTTTAAACTTGATGAAGGGTTGATACAGAATTTCAATCCTGACGTCAATTTCAGCAAAGGGAGTGGGATAGTGTTCATTCCAGGAAGAGATCAAAATGGACATTATGTTTCCTTGTATCCTAGAACAGGTTTGGCCTTCTGA 2343 0.3764 MKLKNGLLLFFMFLDCIFFKVESKCVIGCDIALASYYVMPLVELLNITTFMQSKLVTNSSEVIVRYNRDIVFSNDNLFSYFRINIPFPCECIGGEFLGHVFEYTANEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRPRDTLEKIASHSKLDEGVIQSYNLGVNFSKGSGIVFFPGRDKNGEYVPLYPRTGLGKGAAAGISIAGIFALLLFVICIYIKYFQKKEEEKTKLPQISTALSAQDASGSGEYETSGSSGHGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAVLRGEKTAIKKMDVQASTEFLCELQVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGKDKEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGEESVAESKGLVALFEKALNQIDPSEALRKLVDPRLKENYPIDSVLKMAQLGRACTRDNPLLRPSMRSLVVDLMTLSSPFEDCDDDTSYENQTLINLLYNRDILSNRANIFSYFRVNVPFPCDCIGGEFLGHVFEYTANERDTYDLIANSYYASLTSVQVLQKFNSYHPNHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRSTDSLEKIANAFKLDEGLIQNFNPDVNFSKGSGIVFIPGRDQNGHYVSLYPRTGLAF* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0566 780 SMART serkin_6 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0566 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Psa2g0566 780 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 607 - -
Psa2g0566 780 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 615 777 - -
Psa2g0566 780 Gene3D Transferase(Phosphotransferase) domain 1 392 615 - -
Psa2g0566 780 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 615 777 IPR044812 GO:0019199|GO:0045087
Psa2g0566 780 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 607 IPR044812 GO:0019199|GO:0045087
Psa2g0566 780 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Psa2g0566 780 SMART LysM_2 102 148 IPR018392 -
Psa2g0566 780 SMART LysM_2 654 700 IPR018392 -
Psa2g0566 780 SMART LysM_2 719 761 IPR018392 -
Psa2g0566 780 Gene3D Phosphorylase Kinase; domain 1 301 391 - -
Psa2g0566 780 ProSiteProfiles Protein kinase domain profile. 321 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0566 780 SUPERFAMILY Protein kinase-like (PK-like) 302 593 IPR011009 -
Psa2g0566 780 Pfam Protein tyrosine and serine/threonine kinase 322 591 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0566 Psa-Chr2 26061677 26079920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0566 616 769 Receptor kinase-like Gene Family AT3G21630 48.701 6.00e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa2g0566 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0566 - K13429 gmx:100776847 917.531