Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g0566 | ATGAAACTCAAGAATGGGTTACTGTTGTTCTTTATGTTTCTGGATTGTATTTTTTTCAAAGTGGAATCCAAGTGTGTAATAGGGTGTGATATAGCTTTAGCTTCCTACTATGTAATGCCTTTAGTTGAACTCTTAAATATAACAACCTTTATGCAATCAAAGCTTGTTACCAATTCTTCTGAGGTTATAGTAAGGTACAACAGAGACATTGTATTCAGTAATGATAATCTTTTTTCCTATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGTGAATTTCTTGGGCATGTGTTTGAATACACAGCAAATGAAGGAGATACTTATGATTTAATTGCAAATACCTATTATGCAAGCTTAACAACTGTTGAGGTTTTGAAAAAGTTCAACAGCTATGATCCAAATCATATACCTGCTAAGGCTAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGTCAGATTTCAAAAGACTATGGGCTGTTTATCACTTATCCACTTAGGCCTAGGGATACTCTTGAGAAGATTGCAAGCCATTCTAAACTTGATGAAGGGGTGATACAAAGTTACAACTTGGGTGTCAATTTCAGCAAAGGCAGCGGGATAGTGTTCTTTCCGGGAAGAGATAAAAATGGAGAATATGTTCCTTTATATCCTAGAACAGGTCTTGGTAAGGGTGCAGCTGCTGGTATATCCATAGCTGGAATATTTGCACTTCTGTTATTTGTTATCTGCATATATATCAAGTACTTCCAAAAGAAGGAAGAAGAGAAAACTAAACTTCCACAAATTTCTACGGCGCTTTCAGCTCAAGATGCCTCGGGTAGTGGAGAGTACGAAACTTCGGGATCCAGTGGGCATGGTACCGGTAGTACTGCTGGCCTTACAGGAATTATGGTGGCAAAGTCAACTGAGTTTTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTAGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGTACTCAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCGTCGACAGAATTTCTTTGCGAGTTGCAAGTCTTAACACATGTTCATCACTTGAATCTGGTGAGGTTGATTGGATATTGCGTTGAGGGGTCGCTTTTCCTTGTCTATGAACATATTGACAATGGAAACTTGGGTCAATATTTGCATGGTAAAGATAAAGAGCCATTACCATGGTCTAGTAGAGTCCAAATTGCTCTAGATTCAGCACGAGGCCTTGAATACATTCATGAACATACCGTGCCTGTGTATATCCATCGCGATGTAAAATCAGCAAACATATTGATAGACAAAAACTTGCGCGGAAAGGTTGCAGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCGAAAATAGACGTATATGCTTTTGGAGTTGTTCTTTATGAACTGATATCTGCAAAGAATGCTGTTCTGAAGACAGGTGAAGAATCTGTTGCTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAAAAGCACTTAATCAGATTGATCCTTCAGAAGCTCTTCGCAAATTGGTGGATCCTAGGCTTAAAGAAAACTATCCAATTGATTCTGTTTTAAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGATAATCCACTACTACGCCCAAGTATGAGATCTTTAGTTGTTGATCTTATGACACTTTCATCACCATTTGAAGATTGTGATGATGACACTTCCTATGAAAATCAAACTCTCATAAATCTATTATACAATAGAGACATATTATCCAATCGTGCTAATATCTTTTCCTATTTTAGAGTCAACGTTCCATTCCCATGTGACTGTATTGGAGGTGAATTCTTGGGACATGTGTTTGAATACACAGCAAATGAAAGAGATACTTATGATTTGATTGCAAATTCTTATTATGCAAGTTTGACTTCAGTTCAAGTTTTGCAAAAGTTCAATAGTTATCATCCAAATCATATACCTGCTAAAGCTAAGGTTAATGTCACTGTGAATTGTTCTTGTGGGAATAGCCAGATTTCAAAGGATTATGGCTTGTTTATTACTTATCCGTTAAGGTCTACGGATTCTCTTGAAAAGATTGCGAACGCGTTTAAACTTGATGAAGGGTTGATACAGAATTTCAATCCTGACGTCAATTTCAGCAAAGGGAGTGGGATAGTGTTCATTCCAGGAAGAGATCAAAATGGACATTATGTTTCCTTGTATCCTAGAACAGGTTTGGCCTTCTGA | 2343 | 0.3764 | MKLKNGLLLFFMFLDCIFFKVESKCVIGCDIALASYYVMPLVELLNITTFMQSKLVTNSSEVIVRYNRDIVFSNDNLFSYFRINIPFPCECIGGEFLGHVFEYTANEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRPRDTLEKIASHSKLDEGVIQSYNLGVNFSKGSGIVFFPGRDKNGEYVPLYPRTGLGKGAAAGISIAGIFALLLFVICIYIKYFQKKEEEKTKLPQISTALSAQDASGSGEYETSGSSGHGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAVLRGEKTAIKKMDVQASTEFLCELQVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGKDKEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGEESVAESKGLVALFEKALNQIDPSEALRKLVDPRLKENYPIDSVLKMAQLGRACTRDNPLLRPSMRSLVVDLMTLSSPFEDCDDDTSYENQTLINLLYNRDILSNRANIFSYFRVNVPFPCDCIGGEFLGHVFEYTANERDTYDLIANSYYASLTSVQVLQKFNSYHPNHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRSTDSLEKIANAFKLDEGLIQNFNPDVNFSKGSGIVFIPGRDQNGHYVSLYPRTGLAF* | 781 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g0566 | 780 | SMART | serkin_6 | 321 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g0566 | 780 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 436 | 448 | IPR008271 | GO:0004672|GO:0006468 | |
Psa2g0566 | 780 | PANTHER | LYSM DOMAIN RECEPTOR-LIKE KINASE 3 | 10 | 607 | - | - | |
Psa2g0566 | 780 | PANTHER | LYSM DOMAIN RECEPTOR-LIKE KINASE 3 | 615 | 777 | - | - | |
Psa2g0566 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 392 | 615 | - | - | |
Psa2g0566 | 780 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 615 | 777 | IPR044812 | GO:0019199|GO:0045087 | |
Psa2g0566 | 780 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 10 | 607 | IPR044812 | GO:0019199|GO:0045087 | |
Psa2g0566 | 780 | ProSitePatterns | Protein kinases ATP-binding region signature. | 327 | 349 | IPR017441 | GO:0005524 | |
Psa2g0566 | 780 | SMART | LysM_2 | 102 | 148 | IPR018392 | - | |
Psa2g0566 | 780 | SMART | LysM_2 | 654 | 700 | IPR018392 | - | |
Psa2g0566 | 780 | SMART | LysM_2 | 719 | 761 | IPR018392 | - | |
Psa2g0566 | 780 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 391 | - | - | |
Psa2g0566 | 780 | ProSiteProfiles | Protein kinase domain profile. | 321 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g0566 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 302 | 593 | IPR011009 | - | |
Psa2g0566 | 780 | Pfam | Protein tyrosine and serine/threonine kinase | 322 | 591 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g0566 | Psa-Chr2 | 26061677 | 26079920 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g0566 | 616 | 769 | Receptor kinase-like Gene Family | AT3G21630 | 48.701 | 6.00e-42 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Psa2g0566 | PK_Tyr_Ser-Thr | 1.6e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g0566 | - | K13429 | gmx:100776847 | 917.531 |