Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g0565 | ATGTTTATCTATGTCAGGTACTTCGAAAAGAAGGAAGAAAAGAAAACTATACAGCAAGAAACTTCTATGGCTCTTTCAACTCGAAATGGATGTGAAACTTCGGGATCCAGTGGGCACGCAACTAGTCTTACAGGAGTTATGATGGAAAAGTCAAGAGAGTTTTCATATCAAGAACTAGCAAAGGCTACAAATAACTTCAGCTTGGATAGTAAAATTGGTCAAGGTGGATTTGGCACGGTCTATTACGCAGAACTTAGAGGGAAGAAAACTGCAATAAAAAAGATGAAGGTCCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTTCATCACTGGAACCTGGTACAGTTGATTGGATATTGTGTTGAGGGATTTCTATTTCTTGTATATGAATACATGGACAACGGAAACTTAAGCCAACATCTACATAATTCAGAGAGAGAACCGATGACGTTGCCTATGAGGATGCAAATTGCTCTCGATGTGGCGAGAGGCCTTGAGTATATTCATGATCATTCAGTTCCTGTATATATCCACCGCGACATAAAATCGGACAATATTTTGTTAAATGAAAACTTCACTGGGAAGATTGCAGATTTTGGACTAACCAAGCTTACTGATGTTGCAAGTTCAACAGATAACACTATTCATGTGGCAGGCACATTCGGTTACATGCCCCCGGAAAATGCATATGGACGTATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATCAACTAATTTCTGCTAAAACAGCTGTGATCAAGATCGATAAACCTAGTACCGAGTTCGAAAGTCTTGAGATTAAGACTAATGAGTCTGTTGATGAATACAAGAGCCTTGTAACTTTGTTTGATGAAGTTATTGATGGAGAGGGAGATTGTATAGAAGGTCTAAGAAAGCTGGTGGATCCAAGGCTAGGAGATAACTATTCTATTGATTCTATAAGCAAGATGACACAGCTTGCGAAGGATTGCACAAATCGAGATCCGAAAGGACGTCCAAGAATGAGAGTTGTTGTGGTTTCACTTATGAAATTAAATTCTAGTATTGATGAGGGAAATATGAGAGGTAGTGAAGCATTGAGTCCCATTGTGGAGCATGATGATAAAAATTGA | 1140 | 0.3851 | MFIYVRYFEKKEEKKTIQQETSMALSTRNGCETSGSSGHATSLTGVMMEKSREFSYQELAKATNNFSLDSKIGQGGFGTVYYAELRGKKTAIKKMKVQATREFLAELKVLTSVHHWNLVQLIGYCVEGFLFLVYEYMDNGNLSQHLHNSEREPMTLPMRMQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTGKIADFGLTKLTDVASSTDNTIHVAGTFGYMPPENAYGRISRKIDVYAFGVVLYQLISAKTAVIKIDKPSTEFESLEIKTNESVDEYKSLVTLFDEVIDGEGDCIEGLRKLVDPRLGDNYSIDSISKMTQLAKDCTNRDPKGRPRMRVVVVSLMKLNSSIDEGNMRGSEALSPIVEHDDKN* | 380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g0565 | 379 | PANTHER | LYSM DOMAIN RECEPTOR-LIKE KINASE 3 | 2 | 363 | - | - | |
Psa2g0565 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 181 | 193 | IPR008271 | GO:0004672|GO:0006468 | |
Psa2g0565 | 379 | PIRSF | ILK | 10 | 289 | - | - | |
Psa2g0565 | 379 | PIRSF | ILK | 299 | 365 | - | - | |
Psa2g0565 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 136 | - | - | |
Psa2g0565 | 379 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 2 | 363 | IPR044812 | GO:0019199|GO:0045087 | |
Psa2g0565 | 379 | SMART | serkin_6 | 66 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g0565 | 379 | ProSitePatterns | Protein kinases ATP-binding region signature. | 72 | 94 | IPR017441 | GO:0005524 | |
Psa2g0565 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 351 | IPR011009 | - | |
Psa2g0565 | 379 | ProSiteProfiles | Protein kinase domain profile. | 66 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g0565 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 137 | 370 | - | - | |
Psa2g0565 | 379 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 263 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g0565 | Psa-Chr2 | 26059569 | 26061520 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g0565 | 1 | 370 | Receptor kinase-like Gene Family | AT3G21630 | 54.068 | 2.85e-132 | 390 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Psa2g0565 | PK_Tyr_Ser-Thr | 8.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g0565 | - | K13429 | mtr:MTR_5g086080 | 547.354 |