Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0551 ATGTCAGACGACATGCTTGTTCATTTTGCGTCGAATTCTTCTAACCAGTCGGATCAGTCTCTGCCTACAAAGATTGCTAAGTTGGAAGCTCGAATGGTGGGAAAAGCTTCCTCCACTGCTTCCCAGCAACAAGGTTGGCCTTCTGTTTCTTCTGCTGGGAAATTCAGTGGAGCAGCTGAAGAAATGGTGGAACCTTCTTCTACTTCAAGTGATTCTGATGATGATAATGGTGGGGAATTCTTGATTCAAGCCAACACACGAAAGCGGCTGAAAATTCAAGATGATGTTAACGCTGATGTTTTTGAACGTGTTGAGGCTGTTACTGATGGAAGACAAACTAGTTTGGAGGCTGTGGAGACAAAGAATAATGTTGATGCAAATAGAAAGAAATCTGGCCGTGGAAGAGGGAGTTCTGGTTCAGGTAGGGGCCGTGGTTCCAAATCTAATGATCAGACCAAAACACAAAATTCTCTTCTGGCTTCAGATGTATCTCATAAAGATGGTAGACTCAAAGATCAGCTTCACATTGATAATAGTGCTTCATTAAAGGAGGAGATTGCATCTTTACGTGCTAAAGTTGCTGTGTTGGAGGAAGACTTGCGTAAAGCGAAGCAAGAAACCTCTGAGCATAAGAACCTTTGTCCACAGATTGAAAAGGAACTGCGGGAACTCAAGGATCTTGAACAGCAAATGAAGCCTAAGAGAACAAAAATAATATCTGATTTGTTGATATCAGTTTCAAAAGCTGAGAGACAAGAAGCAAGGCTAAAAGTACGACAAGACTCATTGAGGCTTGGAAATGTTGGCGTATCCAGAGCTGGAACTGTCTTAACTGAGACATGGGAAGATGGTCAGGAGTTAAAGGATCTAATTGCTCAGCTTAAACAACTAACAGACAAAAGGGAGGCAATTGAGCGGCAGCGCAAGTTATTTAAGAAAAAATTATCTGATAAGGGTGATGGAATAGATGCAGATGCTGCATTGCTGGAAGATGTTCTCATTCAGGATGAAATATATAAGGCTCGACTAGCCAACATTAAACGAGAAGAAGAAACTATCTTGCGAGCGAGGGAACGCTACGATCTAGAGAAGGGACGACTAGTTCGTGAAATGAAACGCATACGGGATGAAGATGGTTCACGGTTCAACAGCTTTCAGATTCTAAACCATCGTTATGCCCTTTTAAACCTTCTTGGAAAGGGAGGATTCAGCGAGGTGTACAAGGCTTTTGACTTGGTGGATCATAGATATGTTGCTTGCAAACTTCATGGTTTAAATGCTGGATGGAGTGAAGAGAAAAAGCAAAGTTACATAAGGCATGCAATTCGAGAGTATAATATTCACAAGACCTTGGTCCATCCTCACATTGTTCGCTTATGGGACATCTTTGAGATTGATCATAATACATTTTGCACTGTTCTAGAGTATTGTAGTGGGAAAGATCTCGACGCTGTTCTTAAAACAACATCTTCATTGCCCGAGAAGGAGGCTAGGGTCATTTTAGTTCAGATTTTCCAAGGCCTTACATACATGAATAAAAGAACACAGAAAATTATCCATTATGATTTAAAGCCTGGGAATGTTTTGTTTGATGAGCTTGGTAGTGCCAAAGTAACTGACTTTGGTCTTAGCAAGATTGTGGAGAATGATGTGGGATCTCAGGGTATGGAACTTACATCCCAGGGGGCTGGGACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAACAAGACACCTCTTATATCATCCAAGGTTGATGTATGGTCTGCTGGTGTTTTGTTTTATCAAATGCTCTTTGGTAAACGACCTTTCGGACATGACCAAACACAGGAGAAAATACTTCGTGAAGACACAATTATTAATGCACGCAAGGTTGAATTTCCCTCAAAACCTACTGTTTCTAATGAGGCAAAGGATTTCATTCGGCGATGTCTTACGTATAATCAGAATGAGAGACCGGATGTATTAACTATTGCTCAAGATCCATATCTCACTTACTCAAAGAAACAGTGA 2016 0.4112 MSDDMLVHFASNSSNQSDQSLPTKIAKLEARMVGKASSTASQQQGWPSVSSAGKFSGAAEEMVEPSSTSSDSDDDNGGEFLIQANTRKRLKIQDDVNADVFERVEAVTDGRQTSLEAVETKNNVDANRKKSGRGRGSSGSGRGRGSKSNDQTKTQNSLLASDVSHKDGRLKDQLHIDNSASLKEEIASLRAKVAVLEEDLRKAKQETSEHKNLCPQIEKELRELKDLEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVSRAGTVLTETWEDGQELKDLIAQLKQLTDKREAIERQRKLFKKKLSDKGDGIDADAALLEDVLIQDEIYKARLANIKREEETILRARERYDLEKGRLVREMKRIRDEDGSRFNSFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAGWSEEKKQSYIRHAIREYNIHKTLVHPHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKTTSSLPEKEARVILVQIFQGLTYMNKRTQKIIHYDLKPGNVLFDELGSAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFELNKTPLISSKVDVWSAGVLFYQMLFGKRPFGHDQTQEKILREDTIINARKVEFPSKPTVSNEAKDFIRRCLTYNQNERPDVLTIAQDPYLTYSKKQ* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0551 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Psa2g0551 671 PANTHER MIXED LINEAGE PROTEIN KINASE 1 670 - -
Psa2g0551 671 Coils Coil 217 237 - -
Psa2g0551 671 SUPERFAMILY Protein kinase-like (PK-like) 384 666 IPR011009 -
Psa2g0551 671 MobiDBLite consensus disorder prediction 1 88 - -
Psa2g0551 671 MobiDBLite consensus disorder prediction 62 76 - -
Psa2g0551 671 SMART serkin_6 392 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0551 671 ProSiteProfiles Protein kinase domain profile. 392 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0551 671 MobiDBLite consensus disorder prediction 1 23 - -
Psa2g0551 671 PANTHER BNAC09G36930D PROTEIN 1 670 - -
Psa2g0551 671 Gene3D Transferase(Phosphotransferase) domain 1 383 671 - -
Psa2g0551 671 Pfam Protein kinase domain 393 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0551 671 MobiDBLite consensus disorder prediction 35 51 - -
Psa2g0551 671 ProSitePatterns Protein kinases ATP-binding region signature. 398 421 IPR017441 GO:0005524
Psa2g0551 671 CDD STKc_TLK 391 664 - -
Psa2g0551 671 MobiDBLite consensus disorder prediction 112 166 - -
Psa2g0551 671 Coils Coil 357 377 - -
Psa2g0551 671 Coils Coil 179 213 - -
Psa2g0551 671 Coils Coil 287 314 - -
Psa2g0551 671 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0551 Psa-Chr2 25337641 25346098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0551 397 671 MAP Kinase Kinase Kinase AT1G09000 30.072 3.34e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Psa2g0551 Pkinase 3.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0551 K08864 - gmx:100805168 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0551 2 25337641 25346098 Psa2g0551 2 25337641 25346098 ECH