Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g0549 | ATGAGAGAACAAGATAATTCCGATCATCACAGTAGTGCAGAATTCATCATGAAAGATCACCATCATCACCGTTCATCTTCTTCTTCACTCTCCGGAAAAAAGAGAAAAGAAACCGAATCTTCTTCATCAGGTATCAACAACAACAACGATAGCACTCCTCGTGCTTGTACCGAATGCGGCAAGAAATTCTGGTCATGGAAAGCTCTTTTTGGTCACATGCGTTGCCATCCTGAACGTCAATGGCGAGGCATCAATCCTCCTCCGAATTTCCGACGACATCAACAGCAACAACAACCGCATACTCACAGTCACAGTCCTTCTCAGTTTTCAATCATGACGCAGGAAGATCACGAAGTTGCTGCTTGTTTGCTTTTACTTGCAAATTCAAATTCGAAGACGAACAACAACAGCATCAACAAAACCGCTAAGCTTAAGGCGGTTGCGGGAGTTACTACGGGGGCTACTACTGTGGATGATTCATCGTCGGTTATGGATCAAGAGATTAACAATAGTAATACTCATTTTGTGTGTTCGTGTTGTAACAAGGTGTTTGGATCGCATCAGGCTCTTGGAGGACACAGAGCGAGTCACAAGAATGTCAAGGGCTGTTTCGCCAATACAACTTCTTCACCACCAACAACAGTACCCGCTTCCACTAGTAAGATGATGACGTGGACACAACAAACTCAAGGCGGAGGAGAAGATCATGCTTTTATCGATGGCGGTGGTGGTGCTGGTGCTGATCATCATGATGATGAATATAACCACCACTCCAAGATGAATTTGATGATTGTACCTCGTGACGGTTACAATGCTGACGTGGAAGGGGAAACGGTTAATGAAATTAGTGGAGGAGGAGGACATAAGTGTGGAATATGTTTGAGGGTATTTACAACTGGACAAGCACTTGGTGGACATAAGAGGTGTCATTTTGATTCATCTAATTCTAATTCTGTTACAGCAACAACTTCTAACAAATCATCATCTCTTAATGTTGATCTGAATTTCCCTTTTCCTCCTCTCCCTCCTCCACCACCTTCTCCTCCCGATGATGATGATTCTTCACCTCTTACTCTTGATTTGAAGAATTTTGTTATAGATGTACTTTCTTTGGCTCTTCAAGGAATTTTTCGTGGTTTTAAGGATACCAAAACTCCTGTTATATGTCTAGGCATTGGTAATCTTTCAGCGGTCTTTTTATTTCCCTTACTTATGTATGCACGTGTCTTCCAAGAACGGTATATCTTCAATTCATCTTCTCGGGCACATTCATTCCATTTGTCTGCTGAGTTTAGAGGCTCTGCATCATATGGTAAGGGCCTTGGAGGAGAACGGTACATGTCCGATAGAGAATTATCAAGTGAGGTTGCAAATGTCATGGATGTGTTCCTTGAAGAGATGAAGAAATTGAAAGTGCTTCGCCTCTTCGGAATATTGATGCACACGGCTTTTGATTCCAATCCATGCTCATGGCTTGGCGTTCAATGCGACCATAACAACCATGTGGTTTCCCTTAACCTCACTGCTCATGGTAATTTTGGTCAACTTGGACCACAAATTGGAAACCTTTATCACTTGCATACCCTTTTGTTGTTGGATAATGGTTTCTCAGGAAAAGTGCCTTCAGAGTTAAGCAATTGTACTTTGCTTGAGAATTTAGACCTTTCTGGGAACAAATTCATTGGAAATATACCATATAGTTTGAATAAGTTGCAAAATTTACGGTTTATGAGTTTGTCTTCCAATCTGCTGACTGGTGAAATTCCAGATTCCGTGTTCGAAATTCAATCTCTAGAAGAAGTGAATCTGCACAATAACCTTCTTACTGGTCCTATCCCAACAAAAGTTGGAAACTTGACTCAACTGTTGAGATTGTATCTATATGATAATCAATTGTCAGGGAATATTCCTTCATCCGTTGGTAATTGCAGTAAATTACAGGACCTTGAATTGTCTTTCAATCGTTTGAGAGGCGAAATTCCGGTAAGTGTTTGGAGAATTCAAAGTCTTGTGCACATCTTGATTCACAACAACAGTCTCTCCGGGGAACTACCTATCGAGATGACAAATCTCAAGTATCTAAAAAACATCTCTTTGTTTGATAATCAGTTCTTAGGAATCATACCTCAAAGCTTGGGAATCAACAACAGCTTAGTGAAGTTGGACTGCATGAATAACAAATTCAGTGGTAATATCCCACCCAATCTTTGCTTTGGAAACAATTTGTTATTCCTCAACATGGGAATCAATCAACTTCAAGGTGGCATACCCTCTGATCTAGGAAGATGTGAAACTCTGAGGAGGTTATTTCTCAATGAAAATAATCTCACCGGGTCTCTTCCTGATTTTGAAAGTAATCTGAACTTGAATTACATGGACATGAGCAACAACAATATGAGTGGACCGGTTCCATCAAGTTTGGGAAATTGCGTAAATGTCACATACATTAATTTTTCATGGAACAAGTTTGGAGGGTTCATACCATCAGATCTTGGTAGACTTGTGAATCTTGTGGTTTTGGATCTTTCTCACAACAACTTGGAAGGTTCATTGCCTTCTCAACTGTCAAATTGTACTAAAATGGATCATTTTGATGTAGGGAGGTATCCCACAGTTTTTGGCAGAACTTATAAACATTCGCGAGTTACAACTTGGTGGAAATTTGTTTGGTGGAAAGATTCCTCGATGGAGGGGGAGATTGCGCAATTTGTTCTATGGATTAAATATGAGTGCTAA | 2736 | 0.4046 | MREQDNSDHHSSAEFIMKDHHHHRSSSSSLSGKKRKETESSSSGINNNNDSTPRACTECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRHQQQQQPHTHSHSPSQFSIMTQEDHEVAACLLLLANSNSKTNNNSINKTAKLKAVAGVTTGATTVDDSSSVMDQEINNSNTHFVCSCCNKVFGSHQALGGHRASHKNVKGCFANTTSSPPTTVPASTSKMMTWTQQTQGGGEDHAFIDGGGGAGADHHDDEYNHHSKMNLMIVPRDGYNADVEGETVNEISGGGGHKCGICLRVFTTGQALGGHKRCHFDSSNSNSVTATTSNKSSSLNVDLNFPFPPLPPPPPSPPDDDDSSPLTLDLKNFVIDVLSLALQGIFRGFKDTKTPVICLGIGNLSAVFLFPLLMYARVFQERYIFNSSSRAHSFHLSAEFRGSASYGKGLGGERYMSDRELSSEVANVMDVFLEEMKKLKVLRLFGILMHTAFDSNPCSWLGVQCDHNNHVVSLNLTAHGNFGQLGPQIGNLYHLHTLLLLDNGFSGKVPSELSNCTLLENLDLSGNKFIGNIPYSLNKLQNLRFMSLSSNLLTGEIPDSVFEIQSLEEVNLHNNLLTGPIPTKVGNLTQLLRLYLYDNQLSGNIPSSVGNCSKLQDLELSFNRLRGEIPVSVWRIQSLVHILIHNNSLSGELPIEMTNLKYLKNISLFDNQFLGIIPQSLGINNSLVKLDCMNNKFSGNIPPNLCFGNNLLFLNMGINQLQGGIPSDLGRCETLRRLFLNENNLTGSLPDFESNLNLNYMDMSNNNMSGPVPSSLGNCVNVTYINFSWNKFGGFIPSDLGRLVNLVVLDLSHNNLEGSLPSQLSNCTKMDHFDVGRYPTVFGRTYKHSRVTTWWKFVWWKDSSMEGEIAQFVLWIKYEC* | 912 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g0549 | 911 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Psa2g0549 | 911 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 481 | 904 | - | - | |
Psa2g0549 | 911 | PANTHER | OS08G0446200 PROTEIN | 481 | 904 | - | - | |
Psa2g0549 | 911 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Psa2g0549 | 911 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 290 | 310 | IPR013087 | - | |
Psa2g0549 | 911 | SUPERFAMILY | L domain-like | 663 | 868 | - | - | |
Psa2g0549 | 911 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 54 | 81 | IPR013087 | - | |
Psa2g0549 | 911 | SUPERFAMILY | L domain-like | 484 | 736 | - | - | |
Psa2g0549 | 911 | ProSiteProfiles | Leucine-rich repeat profile. | 836 | 859 | IPR001611 | GO:0005515 | |
Psa2g0549 | 911 | SMART | c2h2final6 | 288 | 310 | IPR013087 | - | |
Psa2g0549 | 911 | SMART | c2h2final6 | 175 | 197 | IPR013087 | - | |
Psa2g0549 | 911 | SMART | c2h2final6 | 54 | 76 | IPR013087 | - | |
Psa2g0549 | 911 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 177 | 197 | IPR013087 | - | |
Psa2g0549 | 911 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 288 | 315 | IPR013087 | - | |
Psa2g0549 | 911 | Pfam | C2H2-type zinc finger | 56 | 78 | - | - | |
Psa2g0549 | 911 | Pfam | C2H2-type zinc finger | 288 | 310 | - | - | |
Psa2g0549 | 911 | Pfam | C2H2-type zinc finger | 174 | 198 | - | - | |
Psa2g0549 | 911 | SUPERFAMILY | beta-beta-alpha zinc fingers | 52 | 79 | IPR036236 | - | |
Psa2g0549 | 911 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 175 | 202 | IPR013087 | - | |
Psa2g0549 | 911 | Gene3D | Ribonuclease Inhibitor | 617 | 879 | IPR032675 | - | |
Psa2g0549 | 911 | SMART | LRR_typ_2 | 834 | 858 | IPR003591 | - | |
Psa2g0549 | 911 | SMART | LRR_typ_2 | 619 | 643 | IPR003591 | - | |
Psa2g0549 | 911 | SMART | LRR_typ_2 | 571 | 595 | IPR003591 | - | |
Psa2g0549 | 911 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 56 | 76 | IPR013087 | - | |
Psa2g0549 | 911 | Gene3D | Ribonuclease Inhibitor | 477 | 616 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g0549 | Psa-Chr2 | 25193334 | 25202095 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g0549 | 501 | 868 | Receptor kinase-like Gene Family | AT1G73080 | 30.623 | 4.97e-44 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Psa2g0549 | zf-C2H2_6 | 2e-08 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g0549 | - | - | mtr:MTR_5g087360 | 590.112 |