Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0531 ATGGAAGCTAATAAACCAGTAACAACAACTACCGAACAACCACAACCCATAAGATGTAAAGCGGCGGTTTGTCGCAAACCAGGTGAGCCATTGATTATCGAAGAGATCGTCGTGGCTCCACCAATGCCACGCGAAGCTCGGATTCGTATCATATGCACTTCTCTTTGTCACAGCGATATCACTTATTGGAAAATGCAGGAGCTTCCTGCAATTTTTCCAAGAATTCTTGGTCATGAAGCAATTGGGGTTGTGGAAAGTGTTGGAGAGGATGTAACAGAAATTACAAAAGGAGACATTGTTATTCCAATCTTCATTGCTGATTGTGAAGAGTGTATAGATTGCAAATCAACAAAGAGTAACCTTTGTTCAAACTTTCCTTTCAAAATTTCACCTTGGATGCTTAGATATGCGAACACAACTAGATTCACCGATCTGAATGGAGAGATTATACACCATTTCATGTTTGCCTCTAGTTTTAGCGAGTACACTGTGGTTGACATTGCAAATCTACTCAAGATTGATCCCACAATTCCTCCTAATAGGGCTTGCCTCCTCAGTTGCGGTGTATCAACAGGGGTAGGAGCTGCTTGGAAAACAGCAAATGTGGAGGCAGGTTCTACAGTAGCCATTTTTGGACTTGGATGTATTGGATTAGCGGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATAATAGGTGTGGATATCAGGCCAGAAAAATTTGACATTGGAAAGAAATTTGGAGTAACGGACTTTATTAATTCTGGAGAATGTGGAAACAAATCGGTGAGTCAGATTATCATAGAGATGACTGGTGGTGGAGCTGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCATGTAGAAAGGGTTGGGGAAAAACAATTGTGTTAGGAGTGGACAAGCCAGAATCTATGTTGAGCCTTAATTGTAATGGGGTCCTTGTTCAAGGGAAGACTCTCATGGGATCCTTATATGGAGGACTCAAACCCAAGTCAGATGTACCTATTCTTCTTAAACGCTACATGGACAAGGAACTGAAGTTGGATGAGTTTGTGACACATGAGGTGGAGTTTAAAGACATTAACAAAGCTTTTGATTTATTGGTTAAAGGAGAGTGTCTTAGATGTGTGATTTGGATGGACAAATGA 1176 0.4116 MEANKPVTTTTEQPQPIRCKAAVCRKPGEPLIIEEIVVAPPMPREARIRIICTSLCHSDITYWKMQELPAIFPRILGHEAIGVVESVGEDVTEITKGDIVIPIFIADCEECIDCKSTKSNLCSNFPFKISPWMLRYANTTRFTDLNGEIIHHFMFASSFSEYTVVDIANLLKIDPTIPPNRACLLSCGVSTGVGAAWKTANVEAGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDIRPEKFDIGKKFGVTDFINSGECGNKSVSQIIIEMTGGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDKPESMLSLNCNGVLVQGKTLMGSLYGGLKPKSDVPILLKRYMDKELKLDEFVTHEVEFKDINKAFDLLVKGECLRCVIWMDK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0531 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 352 IPR036291 -
Psa2g0531 391 Gene3D - 22 384 - -
Psa2g0531 391 Gene3D - 192 332 - -
Psa2g0531 391 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 14 388 - -
Psa2g0531 391 SUPERFAMILY GroES-like 13 202 IPR011032 -
Psa2g0531 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Psa2g0531 391 Pfam Zinc-binding dehydrogenase 216 339 IPR013149 -
Psa2g0531 391 PANTHER ALCOHOL DEHYDROGENASE 14 388 - -
Psa2g0531 391 Pfam Alcohol dehydrogenase GroES-like domain 44 172 IPR013154 -
Psa2g0531 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0531 Psa-Chr2 24635724 24638743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0531 44 190 Monolignol Biosynthesis Gene Families AT4G37970 28.477 1.83e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0531 K00121 - gmx:100806887 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2636 5 201292738 201295726 Psa2g0531 2 24635724 24638743 PCT