Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0520 ATGCAGGTTTTCTGGTTGATGATGTTGTTGTTGTTGATGGTGAAAACTGTATTGGGGAATTCAGATATTGATGCACTTCTTGAACTCAAGAAGGGTATTCAAAGTGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCTAACTCATTGGACTCTAATGGATGTGCTCAAAACTGGTATGGAGTATTCTGTAGTGATGGAAGTGTTGTATCTATCACTCTTGACAATGCCGGTTTGGTTGGCGAGTTTAATTTTGTTGCAGTTAGTTCTCTTCCAATGCTGCGTAATTTGACAGTTGTAAACAATAGTTTCACTGGAAGTATGTCACGAATCGCTCCAATGAAATCGCTTAAGTTTCTTGATTTGTCTCTCAACAAGTTCACCGGCTTGTTTCCTTCTACATTCGTCGAATCGCGTGGTTTATTGTATGTGAATCTCTCTTCGAATGAATTTAGTGGTACTCTCCCGAACGTGTTTCACAAACTTGAGGAGTTGAAGTATTTAGATATTCGCGGTAATAACTTTTCTGGTGATGTTATGCATGTATTTTATCAGATGGGAAGTGTGTTACATGTTGATTTAAGCAACAACAGGTTTTCCGGTGCGTTGGATTTAGGACTTGGAGATGTTTCGTTTCTGTTCTCGATTCAATATCTAAATGCTAGCCATAATTCGTTGACGGGTGAGCTATTTGCTCATGATGGTATGCCGTACCTTGATAATTTAGAGGTCTTCGATGCTAGTAATAACCAGATTGTTGGTAATATACCTTCCTTCGCATTTGTTGTATCGCTGAGGATTCTTCGGCTCGAATGCAATCGGTTGACAGGTTCCCTGCCAGAAACTTTGTTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTTCCATTGGAAGCATTACTTCATTGACTCTAAGGAAGCTTAACATATCTTCAAACAAGTTATCAGGCTCATTACCTTTCAAAGTAGGACACTGTGCCATTATAGATTTGAGCAACAACATGTTGTTTGGTAACTTGTCAAGGATCAAGAATTGGGGAAACTATGTAGAAGTTATTCATCTTAGTACAAACTCGTTATCCGGAACGCTTCCGAACGAAACCTGTCAGTTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAAGGTTTTCTGCCACCAGTTTTAGGAACATTTCCAGAACTAAAAGAGATTGATCTGAGTCTCAACCGGCTTTCTGGGTTCCTCCTACCGACCCTTCTCGCCTCGACCAAGTTGACTACTCTTAATCTCTCAAACAATAACTTTTCTGGACCAGTTCCTTTTCAACTTCCAAGTACTTCATTGGTTTCTTCCGAAAATCTTAGTTTGACATCGCTTGATCTTTCGAACAATAACTTGAATGGAACTCTTTCTCCAAAAATTACGGAGCTTCATAATTTGGAGTATCTTTACCTATGTAACAACAAATTGGAAGGTAGTATTCCTAATGATCTTTCAGATGAATTAAGAGGATTCAATGTGTCCTTTAACAATTTTTCTGGTGTTGTACCTGATAAATTATTGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATCCTATGCTGATATATCCGAATTCTCGGTTATCGCCTAAAGATAGTTCAAATTCCATCCTAGGTTCGAGGTCACATAAGAAAATTTTCACTAGGAGTGTCTTGATTACATGTTTGGTTACTGGTGCTTCTGTGATGGCTATTATGGCTGCAACGATTTTTTATAGGATTCGTCAGAAAAAAGAAAGGGATTCTAAACAAGACGCGACCGCAAGTGACATTGTCCAAGAGAGTAGTTCTCCATCGAAGAGAAGAAACTTGGAATCTTTGCAGCCTTCTCGAAGTGATGATACCGAAAACATTCATCCAACTGTAAAGAAGCCTGAACATCCTGAATTAGTTAAGAACGAGGAAGGAGCGTCTTCGCCAATGTCTATTTTATCGGCTTCGAATCCTTCACCTTCTACTAGCCGTCAGTTCGAGAATCCTAGTTCGCTCAATGTATCATCTCCGGATAAACTGGTCGGGGACTTACATCTATTCGATGGATCGTTGATGTTAACTGCAGAAGAACTTTCGCGTGCTCCGGCTGAAGTTATCGGTAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGAAAAAAGGAGTTGGCAAGAGAAATCAAGAAACTCGGGACGATCAAGCATCCGAGTTTGGTTTCGTTTCTCGGTTGCTACCTCGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTTCATGAATGCTTATTCTTTGGACATTTATCTCCATGAGTCTGATAGAAGAAATCTCGATCCTTTGTCTCTTGATGAAAGGCTCAGGGTGGCCGTAGAAGTGGCGCGATGTCTACTCTACCTACACACCGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTAGAAACTCCAAACAGAAATGCCTTGCTCACTGACTACACCCTGCATCGAATACTTACCGCGGCTGGCACTTCCGAGCAAGTTCTGAATGCAGGCGCGCTTGGTTACCGCCCGCCCGAGTTCGCTAGATCAACCAAACCAAGCCCTTCGTTAAAGAGCGACGTCTACGCGTTCGGAGTCGTCTTGTTAGAGCTCCTAACAGGAAGAAAGTCAGGAGAAATCGTGTCGGGGATTCCTGGCGTGGTTGAACTTACCGAATGGGTGAGATTCTTAGTCGAACGAGATCGCTCTAACCAATGCATTGAAAAGTCCCTTGCAGAAGGATCATCTATGATTCTTGATGATATGCTAAAAGTGGCTATAAGATGCATTCTTCCAGCATCTGAAAGGCCTGACATGAAAACAGTCTTTGAAGATCTTTCAACAATAAGGGAGAGTTGA 2973 0.41 MQVFWLMMLLLLMVKTVLGNSDIDALLELKKGIQSDPFGLVLNSWDSNSLDSNGCAQNWYGVFCSDGSVVSITLDNAGLVGEFNFVAVSSLPMLRNLTVVNNSFTGSMSRIAPMKSLKFLDLSLNKFTGLFPSTFVESRGLLYVNLSSNEFSGTLPNVFHKLEELKYLDIRGNNFSGDVMHVFYQMGSVLHVDLSNNRFSGALDLGLGDVSFLFSIQYLNASHNSLTGELFAHDGMPYLDNLEVFDASNNQIVGNIPSFAFVVSLRILRLECNRLTGSLPETLLKESSMMLSELDLSQNKLEGSIGSITSLTLRKLNISSNKLSGSLPFKVGHCAIIDLSNNMLFGNLSRIKNWGNYVEVIHLSTNSLSGTLPNETCQFLRLTSLKVSNNSLEGFLPPVLGTFPELKEIDLSLNRLSGFLLPTLLASTKLTTLNLSNNNFSGPVPFQLPSTSLVSSENLSLTSLDLSNNNLNGTLSPKITELHNLEYLYLCNNKLEGSIPNDLSDELRGFNVSFNNFSGVVPDKLLQFPESAFHPGNPMLIYPNSRLSPKDSSNSILGSRSHKKIFTRSVLITCLVTGASVMAIMAATIFYRIRQKKERDSKQDATASDIVQESSSPSKRRNLESLQPSRSDDTENIHPTVKKPEHPELVKNEEGASSPMSILSASNPSPSTSRQFENPSSLNVSSPDKLVGDLHLFDGSLMLTAEELSRAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSFLGCYLGPKEHERLIISNFMNAYSLDIYLHESDRRNLDPLSLDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILLETPNRNALLTDYTLHRILTAAGTSEQVLNAGALGYRPPEFARSTKPSPSLKSDVYAFGVVLLELLTGRKSGEIVSGIPGVVELTEWVRFLVERDRSNQCIEKSLAEGSSMILDDMLKVAIRCILPASERPDMKTVFEDLSTIRES* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0520 990 Gene3D Transferase(Phosphotransferase) domain 1 788 990 - -
Psa2g0520 990 SMART LRR_typ_2 262 286 IPR003591 -
Psa2g0520 990 SMART LRR_typ_2 482 506 IPR003591 -
Psa2g0520 990 SMART LRR_typ_2 114 137 IPR003591 -
Psa2g0520 990 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Psa2g0520 990 PANTHER OS07G0626500 PROTEIN 1 988 - -
Psa2g0520 990 Gene3D Ribonuclease Inhibitor 19 183 IPR032675 -
Psa2g0520 990 MobiDBLite consensus disorder prediction 601 684 - -
Psa2g0520 990 MobiDBLite consensus disorder prediction 607 634 - -
Psa2g0520 990 Pfam Leucine Rich repeat 427 442 IPR001611 GO:0005515
Psa2g0520 990 Gene3D Ribonuclease Inhibitor 184 265 IPR032675 -
Psa2g0520 990 Gene3D Ribonuclease Inhibitor 453 532 IPR032675 -
Psa2g0520 990 Gene3D Ribonuclease Inhibitor 266 333 IPR032675 -
Psa2g0520 990 Gene3D Phosphorylase Kinase; domain 1 702 787 - -
Psa2g0520 990 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 988 - -
Psa2g0520 990 MobiDBLite consensus disorder prediction 657 684 - -
Psa2g0520 990 ProSiteProfiles Leucine-rich repeat profile. 290 312 IPR001611 GO:0005515
Psa2g0520 990 SUPERFAMILY Protein kinase-like (PK-like) 714 984 IPR011009 -
Psa2g0520 990 ProSiteProfiles Protein kinase domain profile. 710 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0520 990 Pfam Protein tyrosine and serine/threonine kinase 714 922 IPR001245 GO:0004672|GO:0006468
Psa2g0520 990 SUPERFAMILY L domain-like 238 524 - -
Psa2g0520 990 MobiDBLite consensus disorder prediction 635 652 - -
Psa2g0520 990 Pfam Leucine rich repeat N-terminal domain 20 65 IPR013210 -
Psa2g0520 990 Pfam Leucine Rich Repeat 484 504 IPR001611 GO:0005515
Psa2g0520 990 Gene3D Ribonuclease Inhibitor 334 452 IPR032675 -
Psa2g0520 990 SUPERFAMILY L domain-like 22 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0520 Psa-Chr2 23981653 23985784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0520 54 987 Receptor kinase-like Gene Family AT5G07280 29.120 1.33e-75 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa2g0520 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0520 - - cam:101512473 1447.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0520 2 23981653 23985784 Psa2g0520 2 23981653 23985784 ECH