Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0508 ATGGAGGTTTTAAGTTTTAACAAAAACATGTTGATGATGATGATGATGATGGCTATGATGTGGAACATAGCAAAATCTGAGCTTCACTATGTTGGAGGAAATAAATTTGGATGGATACCTGGTGTTAACCTGACACAATGGTCATTGAATGAACAATTTGTTGTTGGTGAATCTTGGCTATACTTTGGATATGACAGACACAGTTTCAATGTGTTAGAGGTGAACCAGACAAGCTATGAAAAATGCATAGATACAGGATTCGTCAAGAACGTAACGGGAGGAGCCGGACGAGACGTTTTCCAGCTGTCGGAGGCGAAGACCTATTACTTCATAAGTGGAGGAGGTTTCTGTTGGCAAGGGGTGAAGGTTGCTGTTAATGTTCTTGACCATCTTCCACCAGCTCCTGCGCCTGCTCCCAAAGAAAGTGATGGTTCTTCAATTTCATCCACCTTTCAGATATACCATTCACTCGTGGGGGTTATCTTAGTCTTGATGTTCACCAGTTTTTTGATGTAA 516 0.4147 MEVLSFNKNMLMMMMMMAMMWNIAKSELHYVGGNKFGWIPGVNLTQWSLNEQFVVGESWLYFGYDRHSFNVLEVNQTSYEKCIDTGFVKNVTGGAGRDVFQLSEAKTYYFISGGGFCWQGVKVAVNVLDHLPPAPAPAPKESDGSSISSTFQIYHSLVGVILVLMFTSFLM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0508 171 Pfam Plastocyanin-like domain 41 120 IPR003245 GO:0009055
Psa2g0508 171 PANTHER BLUE COPPER PROTEIN 10 159 IPR039391 GO:0009055
Psa2g0508 171 SUPERFAMILY Cupredoxins 28 128 IPR008972 -
Psa2g0508 171 Gene3D - 26 131 IPR008972 -
Psa2g0508 171 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Psa2g0508 171 PANTHER EARLY NODULIN-LIKE PROTEIN 20 10 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0508 Psa-Chr2 23184128 23185169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0508 10 171 Phytocyanin Superfamily AT2G27035 37.654 1.08e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0508 - - mtr:MTR_5g088180 209.149