Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0501 ATGGGAAACTGTTTCAGAAAACCTGTTTGTCATGTCTCTTCATCAAGTTTATTTGGAAGTACAAAGACTCAAAGTAAGACAACACAGACTTCAAATTCTTCTGAACCGAAAACGAATATGGATACTTCATGGTCGATTGACGAGAAATCCATCTCTAATGATGTTAAGTCCTTCAGCTTTAACGATCTAAAGGAGGCGACAAGGAACTTCCGCCAAGAAAATTTGATCGGTGAGGGAGGGTTTGGATTCGTCTACAAAGGATGGATAGATGAGAATACCGGTGCTCCTACAAAACCAGGAAATGGAATTGTAGTAGCCATTAAGAAACTTAAACCAGAAAGTTTTCAAGGTCACAAGGAATGGCTTGCGGAAGTGAATTATCTCGGCCAACTTCACCATGAAAATTTGGTGAAGCTTATTGGTTATTGCTCAGAAGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCACTTATTCAGAAAAGGCGTTCAACCGATTTCCTGGATTACACGAATCAATATTGCGATCGGTGTTGCAACAGGACTAGCATTCTTACATTCCCTCGATGCAAATGTTATTTATCGCGATTTAAAAGCTTCCAACATTCTACTTGATTCGGATTTCAACGCAAATCTTTCCGATTTCGGCTTGGCAAGAGACGGCCCGACCGGAGATAACACTCACGTTTCAACTCGAATTATCGGAACTCATGGTTATGCTGCCCCAGAATATGTAGCTACAGGTCATTTAACGCCGAGGAGCGACGTATACAGCTTCGGCGTCGTCCTGTTAGAGCTACTAACAGGACGACGTGTAGTCGACGACGATAGACCAACATATTCGGAAGAAACGCTAGTAGATTGGGCAATGCCTTTTCTGAGTGACAGCAGAAGAATATTGAGAATCATGGATACAAAATTAGGCGGACAATACTCAAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGTTCTAAAGTGTCTTCATACTGATCCTAAACACAGACCAACCATGGTTAATGTTTTAGCTGCATTGGAAGCATTACAATCCTCAAATTCAGTACCAAGAACACCAAAATCTGGATCTGATCATAATCATCATGCAACAAAACATTCTAGTCATCATCATTCACATAAGTCAATTGCGAGTAATACTAGAAAACATTGA 1185 0.4059 MGNCFRKPVCHVSSSSLFGSTKTQSKTTQTSNSSEPKTNMDTSWSIDEKSISNDVKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWIDENTGAPTKPGNGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWITRINIAIGVATGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVDDDRPTYSEETLVDWAMPFLSDSRRILRIMDTKLGGQYSKKGAQAAAALVLKCLHTDPKHRPTMVNVLAALEALQSSNSVPRTPKSGSDHNHHATKHSSHHHSHKSIASNTRKH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0501 394 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Psa2g0501 394 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Psa2g0501 394 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Psa2g0501 394 PANTHER OS01G0588500 PROTEIN-RELATED 17 381 - -
Psa2g0501 394 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0501 394 MobiDBLite consensus disorder prediction 374 394 - -
Psa2g0501 394 MobiDBLite consensus disorder prediction 21 45 - -
Psa2g0501 394 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0501 394 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0501 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Psa2g0501 394 CDD STKc_IRAK 76 354 - -
Psa2g0501 394 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 381 - -
Psa2g0501 394 SUPERFAMILY Protein kinase-like (PK-like) 50 352 IPR011009 -
Psa2g0501 394 MobiDBLite consensus disorder prediction 356 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0501 Psa-Chr2 22651123 22653818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0501 3 361 Glycoside Hydrolase AT3G07070 46.809 4.25e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa2g0501 Pkinase 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0501 - - gmx:102664409 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0501 2 22651123 22653818 Psa2g0501 2 22651123 22653818 ECH
Psa5g4325 5 361459923 361462269 Psa2g0501 2 22651123 22653818 PCT