Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0500 ATGGAGAAGATAGATGCGAAGAGTGTAAAATATATGACTGATATGATATTTGATCATACAATATTTCCGTTTATAAGTATTAACACAAACGGTTCCGATAAAGACCTGAGATTTTTAGTAGTCGATGTTTGTATGGACATGCCACCAAAGATTGTATCCGATGGAATTTGGGCTAATCGCGATCACGGTGTAAAGCCGATGAAATCAACTCTGCCATTGTTAGAGCTGCAAATTCTTACCATCTTTGCCATTACTCAATGCTTTCATTTGGTTCTTAAGCGACTCGGTGTCCCTTATTTCGTTTCACAGATCATGGCTGGTTTGGTTTTAGGTCCTTCGTTTAAGATTTCAAATTCATGGAATCATTTCAAAAACCGCTTGTTTCCTTACGGTTCCGAAGATGTAATAGGTGTGATATCGATAATCGGTTATGGATTATTCCTGTTTCTAAATGGTGTGAAAATGGATTTCAGCATGATAACAAGAACAGGTAGAAAAGCATGGACGATAGCGTTTTGTTCGTTTGGGATTCCGACGTTTCTTGGTCTCGTAATGAGTTACATGTTCTTAGAAGATTGGCAAAACTACCTTGGAGAATACGAATCGAAAAATCTTCCTGTTATAGTTATAGGACAGAGTGGCTGTTACTTTGCTGTCATAGCTTCTTTGCTTTCTGATCTTGATATTCTTAACTCCGAACTCGGACGTTTAGCACTCTCAACGGCTATGGTTATGGATGCTTTCAACTCGGTTGTTTCAGGAATGGGCACTGCTTTTATTAGCAGCATTAAAACGGATTCGCATGATGTTGATGATGGAAAAGGACTCGGTAGAGCTCTTGTAACTGTTTTCTATTACTTCTGTTTCATAGGAGTGACTCCTCTTTTGTTGCGTCCTGTAATGAAATGGTTTGTCCGAAACACGCCAGAAGGTAGACGGTTGAAGAAAACATATACCTATATCGTGTTCATCATGGCTCTTGCAGTTGGAATGTTGGGAATGACAGCGAACCAAAGTGTTTTAGCCGGATTCTTAATTCTCGGTCTAATTGTTCCTGACGGTGCTCCGTTAGGAACCGAAATGATTAAGCAGTTGGAGTTGTTTTCGACTTGGTTTCTTTGTCCTGTTTTTGTCACAAGCTGTGCTATGAAAGTCGATATCGGTGTACCTGTTGATAGCAAGTTGATTCTTGTTTGGGTTGGGTTTATTGTTATTGTTCATTTGTTTAAGATGATTATGACAATTGGAGTTTGTTGGCATTGTAACATGCCTAAGACTGATGGTTTGTGTCTTGCTCTCATGTTAAGCTGTAAAGGTGTTGTGGATTTTTGCACCAATGTGTTTCTTCATGATGCCATGCTTTTGAGCAATGAAGCACTATCTGTTATGACTTTAGGTGTGTTGGTGATGGGAACCACGGCGCGAATCGGTGTCAAGTTCTTGTATGACCCTTCAAGGAAATATGCAGGTTATCAAAAAAGAAGCGTCTTGAATTTGAAACCAAACTCAGAGCTTAGGATAGTTTCATGCATCCACAAACCAAGTCACATAACTCCAATCAAGAATATTCTTGAGATGTGCACTCCAACAACAAGCAATCCATTGGTAGTTCATGTATTGCATCTCATGGAGCTTGTTGGAAGATCCTCTCCTATTTTCATCTCGCATCGCCTTCAGGAACGGGTTGGTTCGGGTCACCATACTTTCTCTGAGGACGTCGTTGTTACTTTTGATCTTTTCGAACACGACAATGCGGGTACTGCAACGGCGAGTACCTACACGGCTGTATCTCCGTTGCGTTTGATGCCCGACGATATCTGTTATCTTGCATTGGACAAACTCGCGTCCATGATCCTTCTTCCTTTTCATTTGAGATGGGCAGAGGATGGTTCTGTTGAATCCGCGGACGAGAATATTAGGGCTTTGAACACCAAGGTTCTCGAGAGAGCACCGTGTTCGGTAGCGATCCTTGTCAATCGAGGATACTCTTCATCTATCAGCATAAACGATAATTATACAAAGGAAATCGCGCTGATTTTCTTAGGAGGTGCAGATGATAGAGAAGCACTGTGTTGGGCAAAAAGGGCTATCAAAGAAAATGCTTTTCACTTAGTTGTGTATCACTTGGTTTCAACAAGCAAGAACAATGAGTTCAGTAATTGGGATGTTATGCTTGATGATGCGATACTAAAAGATGTTAAGGGAACTTACGGTAGTGTAAACAATGTGACATATGATAGAGTAAACGTTGAAAACACTTCAGATACCACTGCTTTCATCTCAGACATCGCGAATCAGTACGATTTCATTATCGTCGGGAGACGTAACGGGATCAAATCGCCTCAGACCGCAGCACTTGAAGATTGGACCGAGTATCCCGAGTTAGGTGTGATCGGTGATTTGCTTGCTTCACCAGATACTAATACCAAAGCTTCAATTCTAGTTGTGCAGCAACAAGTAGTGCTTAAGTCATGA 2475 0.4097 MEKIDAKSVKYMTDMIFDHTIFPFISINTNGSDKDLRFLVVDVCMDMPPKIVSDGIWANRDHGVKPMKSTLPLLELQILTIFAITQCFHLVLKRLGVPYFVSQIMAGLVLGPSFKISNSWNHFKNRLFPYGSEDVIGVISIIGYGLFLFLNGVKMDFSMITRTGRKAWTIAFCSFGIPTFLGLVMSYMFLEDWQNYLGEYESKNLPVIVIGQSGCYFAVIASLLSDLDILNSELGRLALSTAMVMDAFNSVVSGMGTAFISSIKTDSHDVDDGKGLGRALVTVFYYFCFIGVTPLLLRPVMKWFVRNTPEGRRLKKTYTYIVFIMALAVGMLGMTANQSVLAGFLILGLIVPDGAPLGTEMIKQLELFSTWFLCPVFVTSCAMKVDIGVPVDSKLILVWVGFIVIVHLFKMIMTIGVCWHCNMPKTDGLCLALMLSCKGVVDFCTNVFLHDAMLLSNEALSVMTLGVLVMGTTARIGVKFLYDPSRKYAGYQKRSVLNLKPNSELRIVSCIHKPSHITPIKNILEMCTPTTSNPLVVHVLHLMELVGRSSPIFISHRLQERVGSGHHTFSEDVVVTFDLFEHDNAGTATASTYTAVSPLRLMPDDICYLALDKLASMILLPFHLRWAEDGSVESADENIRALNTKVLERAPCSVAILVNRGYSSSISINDNYTKEIALIFLGGADDREALCWAKRAIKENAFHLVVYHLVSTSKNNEFSNWDVMLDDAILKDVKGTYGSVNNVTYDRVNVENTSDTTAFISDIANQYDFIIVGRRNGIKSPQTAALEDWTEYPELGVIGDLLASPDTNTKASILVVQQQVVLKS* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0500 824 Gene3D - 74 489 IPR038770 -
Psa2g0500 824 PANTHER CATION/H+ EXCHANGER 2 27 822 - -
Psa2g0500 824 PANTHER CATION/H + ANTIPORTER 27 822 - -
Psa2g0500 824 Pfam Sodium/hydrogen exchanger family 83 470 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0500 Psa-Chr2 22393718 22398968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0500 43 816 Antiporter Super Family AT3G44900 36.341 5.47e-157 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0500 - - gmx:100778180 1050.43