Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0496 ATGGCGTCTAAAGCTATTGCTCCAATTGAACAACCCAGAGGTGAGAATAAGAAAAAGAATTTAGGAGTAGAAGGAAGAAACAGAAAGGTTCTTGGAGATATTGGAAATCTTGTGATTAATCCAGCAGATCCTCATGCTAATGAGCCTAAGCGCATCACAAGGAACCAATTAGCTGCTATTGCTCAAGCAGCAGAGAAGAACAAGATATTAGTACCTGATGTTGTCAATGGAAACTTTGTTGCTGCTAACAAGATGGAACAAGCTCCGAAACCTGCTGAACATGAAGTTATTGTCATCAGTTCTGATGAAGAAGCTGAAGTGAAAGAGAAAAGGCCACTTAAAGGGAGAAAGTTAAGAGACAGATCTAAGATAAATGTCAGGACATTTAGCTCTGTGCTTTCAGCTAGAAGCAAGGCTGCTGGTAGAAGTGTGCCAAATGATTTGGTAATGAACATTGATGCAACTGACAAGGACAATGAATTGGCTGCAACTGAGTATATTGATGATATTTACAAGTTTTACAAACTCAGTGAAGATGACTGTCCTGTACATGATTACATGGTTTCACAGCCGGATATAAATGCTAAGATGAGAGCGATTCTTATTGATTGGTTGATTGAAGTTCATCGAAAATTCGAACTCATGCCAGAAACTTTCTATCTGACTCTTAACATAGTTGACCGATTCTTGTCCATGAAGGCTGTTCCTAGAAAGGAACTTCAGCTTGTTGGCATAAGCTCAATGCTTATTGCATCTAAGTATGAAGAGATATGGGCACCAGAGGTTACAGATTTTGTATGCATATCAGACAATGCCTATGTTAGAGAACAGGTTTTGGTTATGGAGAAAACAATCCTGGGAAACCTGGAATGGTATTTAACAGTTCCTACTCCTTATGTCTTTCTGGTTCGGTACATCAAAGCCTCCACTCCCTCTGATGAACAGATGGAAAATATGGTGAATTTCCTAGCTGAACTTTCTATGATGCATTATGTTACTGTATCATCGTACAGTCCTTCGATGATTGCTGCTTCTGCTGTTTATGCGGCAAGATCTACACTTAAGAGGAGTCCTTTTTGGACTGACACTCTCGAGCACTACACAGGCTATTCTGAGGAACAACTAAGGGATTGTGCCGAACTGATGGTCAGTTTTCATTCTGCTGCACCAGAGAATAAGCTGAGGGCAATTTATAAGAAATTCTGTGGCACAGATCGTTGTACTGTTGCTCTTATGGCTCCAGCCAAAAACTTGTCAGCAGAGTCTTGA 1269 0.4035 MASKAIAPIEQPRGENKKKNLGVEGRNRKVLGDIGNLVINPADPHANEPKRITRNQLAAIAQAAEKNKILVPDVVNGNFVAANKMEQAPKPAEHEVIVISSDEEAEVKEKRPLKGRKLRDRSKINVRTFSSVLSARSKAAGRSVPNDLVMNIDATDKDNELAATEYIDDIYKFYKLSEDDCPVHDYMVSQPDINAKMRAILIDWLIEVHRKFELMPETFYLTLNIVDRFLSMKAVPRKELQLVGISSMLIASKYEEIWAPEVTDFVCISDNAYVREQVLVMEKTILGNLEWYLTVPTPYVFLVRYIKASTPSDEQMENMVNFLAELSMMHYVTVSSYSPSMIAASAVYAARSTLKRSPFWTDTLEHYTGYSEEQLRDCAELMVSFHSAAPENKLRAIYKKFCGTDRCTVALMAPAKNLSAES* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0496 422 PIRSF Cyclin_A_B_D_E 2 422 IPR039361 -
Psa2g0496 422 SUPERFAMILY Cyclin-like 158 293 IPR036915 -
Psa2g0496 422 SUPERFAMILY Cyclin-like 297 417 IPR036915 -
Psa2g0496 422 ProSitePatterns Cyclins signature. 198 229 IPR006671 -
Psa2g0496 422 Gene3D - 183 294 - -
Psa2g0496 422 Gene3D - 169 410 - -
Psa2g0496 422 SMART Cyclin_C_2 296 415 IPR004367 -
Psa2g0496 422 Pfam Cyclin, N-terminal domain 169 293 IPR006671 -
Psa2g0496 422 PANTHER CYCLINS 20 417 IPR039361 -
Psa2g0496 422 MobiDBLite consensus disorder prediction 1 24 - -
Psa2g0496 422 CDD CYCLIN 294 383 IPR013763 -
Psa2g0496 422 PANTHER CYCLIN-B1-4 20 417 - -
Psa2g0496 422 CDD CYCLIN 197 286 IPR013763 -
Psa2g0496 422 SMART cyclin_7 300 384 IPR013763 -
Psa2g0496 422 SMART cyclin_7 203 287 IPR013763 -
Psa2g0496 422 Pfam Cyclin, C-terminal domain 296 413 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0496 Psa-Chr2 22231197 22234505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0496 1 419 Core Cell Cycle Gene Families AT2G26760 50.827 6.80e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0496 K21777 - gmx:547782 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0496 2 22231197 22234505 Psa2g0496 2 22231197 22234505 ECH