Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa2g0483 | ATGTTGAGAGCCTGTCAGTTACGAGTTGGGTTGCCGATTCCAAAACTCTCTTCACTCTCCACAATTCCCTCACTCTTCTCTTTCTCTTTTTCATCATATTCTCACTCCCAGTTCCACGCTTGTTCATCCACAAAACCCTTCCATTTTCACTCATCTTCTTCCCTTCCCCTTTCACCCTTTACTTCTATCATGCCTCCCAAATCAACAGCTTCGTATAGTACTGGGAGTAGTGCTGTTGAAGGTGGTGGGGAAAGGGAAATATTGGTTCAGCATTTGTTGGTGAAAGAAGATGATCAGAAACTGTTGTTGGATCTTCAATACAGAGTCGCTAGAGGTGAAGATTTGAGTGATCTTGCGGTGGACCATTCAATTTGCCCTTCTAAAGACGAAGGAGGAATGCTCGGGTGGGTTCGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCGTTTAATGCACCTTTAAACAAAGTTGTAAGATGCAAGACAAATTTTGGATGGCACCTACTACAGGTTTTATCTGAAAGGGAAGAATCGGCACTTAAAGACATTCAACCTAATGAGTTGCATGTGAAATTTCAAGATCCTACGTTTTTCGAGGAGGCGCAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCACAGCGTCTTTGCCGGGATTTACAGTTCTTCCCCTCCGACAATTTGGAACCTGGGGGCCTGAAATAAACACCAAATTTGATCTTCAAAAGGATACATATGTTCTGTGTCATCACGGTGCGCGGTCGATGCAGGTTGCCAGGTGGCTGCAGTCACAGGGGTTCAGGAAAGTTTACAATATTTCCGGAGGAATCCATGCCTATGCGGTGCAGGCCGATCCATCAGTTCCTACATACTGA | 879 | 0.4505 | MLRACQLRVGLPIPKLSSLSTIPSLFSFSFSSYSHSQFHACSSTKPFHFHSSSSLPLSPFTSIMPPKSTASYSTGSSAVEGGGEREILVQHLLVKEDDQKLLLDLQYRVARGEDLSDLAVDHSICPSKDEGGMLGWVRKGQMVPEFEEAAFNAPLNKVVRCKTNFGWHLLQVLSEREESALKDIQPNELHVKFQDPTFFEEAQLIDVREPEEVATASLPGFTVLPLRQFGTWGPEINTKFDLQKDTYVLCHHGARSMQVARWLQSQGFRKVYNISGGIHAYAVQADPSVPTY* | 293 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa2g0483 | 292 | Pfam | PPIC-type PPIASE domain | 95 | 174 | - | - | |
| Psa2g0483 | 292 | Gene3D | - | 178 | 289 | IPR036873 | - | |
| Psa2g0483 | 292 | Gene3D | - | 72 | 177 | IPR046357 | GO:0003755 | |
| Psa2g0483 | 292 | ProSiteProfiles | Rhodanese domain profile. | 198 | 290 | IPR001763 | - | |
| Psa2g0483 | 292 | Pfam | Rhodanese-like domain | 202 | 282 | IPR001763 | - | |
| Psa2g0483 | 292 | SMART | rhod_4 | 184 | 287 | IPR001763 | - | |
| Psa2g0483 | 292 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 292 | - | - | |
| Psa2g0483 | 292 | SUPERFAMILY | FKBP-like | 85 | 173 | - | - | |
| Psa2g0483 | 292 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 84 | 174 | IPR000297 | GO:0003755 | |
| Psa2g0483 | 292 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 173 | 290 | IPR036873 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa2g0483 | 85 | 292 | Sulfurtransferasese or Rhodanese | AT5G19370 | 67.788 | 1.44e-103 | 302 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa2g0483 | - | - | mtr:MTR_5g089330 | 466.077 |