Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0482 ATGGGCAATTGTTGCTCAGGTGGCACTGAAGATCCAGAAGACAAGGGAGAAACAGATCAACAAAACAACAACAATGCAAATGGAGATTCTTCTGCTACAACGCCGCCACCATCTTCGAAACCATCTCCTCAACCTTCTAAATCCTCGAAACCGGCCGCGATGGGACCGGTTCTCGGAAGACCAATGGAAGATGTCAAAAGCACTTATAGCATTGGAAAGGAACTAGGGAGAGGACAATTTGGTGTAACATATTTGTGCACACATAAAACCTCTGGAAAACAATATGCTTGCAAAACAATAGCCAAGAGAAAGCTTGTGAACAAAGAAGACATTGAAGATGTTAAGAGGGAGGTTCAAATCATGCATCATCTCACAGGACAGGCTAACATTGTCGAACTTATCGGCGCTTTTGAAGATAAACAATCTGTTCATTTGGTCATGGAGTTGTGCGCGGGAGGTGAACTTTTCGATCGAATCATCGCGAAAGGTCATTACACCGAACGCGCTGCGGCTTCTCTGTTGAGAACCATTGTCCAGATTGTTCATACTTGTCATTCCATGGGTGTTATACATAGAGACCTTAAGCCTGAGAATTTCCTTTTGTTGAGCAAGGACGAGACTTCGCCTCTCCAAGCTACCGATTTCGGTTTATCCGTCTTTTACAAGCAAGGAGAAGTGTTTAAAGATATCGTCGGTAGCGCGTATTACATTGCGCCGGAGGTTTTGAAGAGGAAATACGGACCTGAAGTAGACATTTGGAGTGTTGGTGTGATGTTATACATTCTTCTATGTGGTGTTCCACCATTTTGGGCAGAATCTGAAAATGGCATATTCAATTCCATCCTAAAAGGCCACGTCGACTTCTCGAGCGATCCGTGGCCCTCCATTTCGCCTGCAGCAAAGGATCTTGTAAGGAAAATGTTGAACTCGGATCCTAAGCAGAGGCTAACAGCACATGAAGTTTTGAATCATCCATGGATCAAGGAAGACGGAGAAGCACCGGATACACCTCTTGACAATGCTGTGCTCAACAGACTCAAACAGTTCAGAGCGATGAACCAATTCAAGAAAGTTGCGCTGAAGGTTATTGCTAGCTGCTTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTTAAGGGTATGGATACAGACAACAGTGGAACCATAACGATCGAAGAGCTAAAACAAGGACTTGCAAAACAAGGAACTAGGTTGTCAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAACGGAATTATAGATTATGACGAGTTCATCACAGCAACGATGCACATGAACCGAATGAACAGAGAAGAACATGTTTATACTGCATTCCAATACTTCGATAAAGATAACAGCGGATACATTACTATTGAAGAACTAGAGCAAGCTCTACATGAGTATAACATGCATGATGGCAGAGATATAAAGGAAATAATTTCAGAAGTTGATGCAGATAATGATGGTCGGATTAACTATGATGAGTTTGCTGCTATGATGAGCAAAGGAAACCCAGAAGCACATACCAAGAAGCGGCGTGATTCAACTTTTTAA 1572 0.4275 MGNCCSGGTEDPEDKGETDQQNNNNANGDSSATTPPPSSKPSPQPSKSSKPAAMGPVLGRPMEDVKSTYSIGKELGRGQFGVTYLCTHKTSGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLTGQANIVELIGAFEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLSKDETSPLQATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESENGIFNSILKGHVDFSSDPWPSISPAAKDLVRKMLNSDPKQRLTAHEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALKVIASCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTRLSEQEVKQLMEAADADGNGIIDYDEFITATMHMNRMNREEHVYTAFQYFDKDNSGYITIEELEQALHEYNMHDGRDIKEIISEVDADNDGRINYDEFAAMMSKGNPEAHTKKRRDSTF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0482 523 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Psa2g0482 523 ProSiteProfiles EF-hand calcium-binding domain profile. 481 512 IPR002048 GO:0005509
Psa2g0482 523 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0482 523 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Psa2g0482 523 SUPERFAMILY EF-hand 367 507 IPR011992 -
Psa2g0482 523 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Psa2g0482 523 Gene3D Transferase(Phosphotransferase) domain 1 155 334 - -
Psa2g0482 523 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
Psa2g0482 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 515 - -
Psa2g0482 523 SMART efh_1 410 438 IPR002048 GO:0005509
Psa2g0482 523 SMART efh_1 481 509 IPR002048 GO:0005509
Psa2g0482 523 SMART efh_1 374 402 IPR002048 GO:0005509
Psa2g0482 523 SMART efh_1 446 474 IPR002048 GO:0005509
Psa2g0482 523 ProSitePatterns Protein kinases ATP-binding region signature. 75 102 IPR017441 GO:0005524
Psa2g0482 523 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 19 515 - -
Psa2g0482 523 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Psa2g0482 523 CDD STKc_CAMK 69 326 - -
Psa2g0482 523 ProSiteProfiles Protein kinase domain profile. 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0482 523 SMART serkin_6 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0482 523 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Psa2g0482 523 SUPERFAMILY Protein kinase-like (PK-like) 47 355 IPR011009 -
Psa2g0482 523 MobiDBLite consensus disorder prediction 1 61 - -
Psa2g0482 523 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Psa2g0482 523 MobiDBLite consensus disorder prediction 19 35 - -
Psa2g0482 523 Pfam EF-hand domain pair 445 507 IPR002048 GO:0005509
Psa2g0482 523 Pfam EF-hand domain pair 375 435 IPR002048 GO:0005509
Psa2g0482 523 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Psa2g0482 523 Gene3D - 335 513 - -
Psa2g0482 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0482 Psa-Chr2 21349854 21352906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0482 1 523 EF-hand Containing Proteins AT5G12180 80.114 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa2g0482 Pkinase 3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0482 K13412 - gmx:100819061 927.932