Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0469 ATGGCAGATAATGTACTGTCACAAAGTTCTCCTTCCTTTGACAGATGCATCAGTCACCCTCAAGAACTCTCGGAGGATCTAGCCACACCATCCTCCAAGAGATCTAGAGGTAGACCTAAGGGCTCCAAGAACAAACCTAAGCCACCTTCTGTGATCATGGTAGAGCCTGAAATCTTCATGGAACCGATTTTCATTGAAATCCCTGCTGGCAAAGATGTCGTCGAGTCGATAATAAAGACGGCTTGGCGTCATCAAGCTGATATATCAGTGCTGAAAGGTTCTGGTCTTGTCTCTGAAGTTAGTCTTCTCAACTCGGCGTCGCAAAACTCGCATTTCACTATCAGAGGACACTTGCAAATGACATCTCTCTCTGGAACTTATTTTAATCCTGATTCGGATCGCGATCCTTCGGAGTTTGTCGTCGATCCTGCTTACTCTTCGTTTTCCATTTTCCTGTCTGGTAATCACGGTCAAGTATTTGGTGGAATTGTTAGAGGAAGGGTTAGGGCTTCAGGTGTTGTTCTGGTTTCTGCCACTCTTTTGAGGAAGCCAAAGTTTTGTAGGGTGGCCTCCGATAATGGAGATGGCCGCGAAGATAAAAAGGATGATCCAAGACATGGTGGTGCCGTCGTCCATGATGGTGTTGTTGCACCACAACATAACAGTGCAAACGACACTGCCAATGTGTCCAGATACGGTGTTGCAGATGCTAATTCAACTCAGCTAAACAGCCAAGTTGTCAACCCTCAAGCACCGGCACAACGCCATTTGTAA 774 0.4625 MADNVLSQSSPSFDRCISHPQELSEDLATPSSKRSRGRPKGSKNKPKPPSVIMVEPEIFMEPIFIEIPAGKDVVESIIKTAWRHQADISVLKGSGLVSEVSLLNSASQNSHFTIRGHLQMTSLSGTYFNPDSDRDPSEFVVDPAYSSFSIFLSGNHGQVFGGIVRGRVRASGVVLVSATLLRKPKFCRVASDNGDGREDKKDDPRHGGAVVHDGVVAPQHNSANDTANVSRYGVADANSTQLNSQVVNPQAPAQRHL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0469 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 62 178 IPR005175 -
Psa2g0469 257 Gene3D - 62 197 - -
Psa2g0469 257 ProSiteProfiles PPC domain profile profile. 57 203 IPR005175 -
Psa2g0469 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 237 IPR014476 GO:0003680
Psa2g0469 257 MobiDBLite consensus disorder prediction 1 17 - -
Psa2g0469 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 21 237 - -
Psa2g0469 257 CDD DUF296 62 176 IPR005175 -
Psa2g0469 257 MobiDBLite consensus disorder prediction 1 50 - -
Psa2g0469 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0469 Psa-Chr2 20733178 20734203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0469 33 232 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.173 1.56e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0469 - - mtr:MTR_5g089600 206.838