Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0468 ATGGCAGATAATGTATTCTCACAAAGTTCTCCCTCCTTTAACAGATGCATCAGTCACCCTCAAGAACCCTCGGAGGATCTAACCACACCATCCTCCCAGAGATCTAGAGGTAGACCTAAGGGCTCCAAGAACAAACCTAAACCACCTTCTGTGGTCATGGTAGAGCCTGAAACCTTCATGGAACCAATTTTTATTGAAATTCCAACTGGAAAAGATGTCGTCGAGTCGATAATAAAGACGGCTTGGCGTCATCAAGCTGATATATCAGTGCTTGGAGGTTCTGGTCTTGTATCTGAGCCAAAGCTTTATAGGGTGGCCTCCAACAATGGAGACAGACGCGAAGATGGAAAGGTTGATCCAAGACTTGTTGGTGTTGTTCTACAACATAACAACAAAAACAACGTTGCCAATGTGTCCAATGCTCCTCATGCACTGGCACAACCCATTTTTACTAATAATTTCTAG 465 0.4387 MADNVFSQSSPSFNRCISHPQEPSEDLTTPSSQRSRGRPKGSKNKPKPPSVVMVEPETFMEPIFIEIPTGKDVVESIIKTAWRHQADISVLGGSGLVSEPKLYRVASNNGDRREDGKVDPRLVGVVLQHNNKNNVANVSNAPHALAQPIFTNNF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0468 154 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 99 IPR014476 GO:0003680
Psa2g0468 154 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 21 99 - -
Psa2g0468 154 SUPERFAMILY AF0104/ALDC/Ptd012-like 56 110 - -
Psa2g0468 154 MobiDBLite consensus disorder prediction 1 37 - -
Psa2g0468 154 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0468 Psa-Chr2 20676472 20677188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0468 33 98 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 48.485 3.97e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0468 - - mtr:MTR_5g089600 107.071