Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0457 ATGAATATTCCTATGTCTTCTTTCACCTTTCTTCTCTACACCCTCTTTCTTTTCTCTACTCTTTCTCTTTCTTCATCACTTCCATTGTCTTTGAAAACACAAGCTTCTATCTTAGTTTCTCTCAAACAAGATTTCCATTCCAAAACATCCTTAAAAACATGGAACATCTCTAACTACATGTCCCTTTGTACAACATGGTATGGCATCCAATGTGACACAAACAACACTTCTGTTGTGTCACTAGACATATCAAACTTGAATGTTTCTGGAACCTTCTCATCTTCCATCACAAAGCTATCAACCTTGAGAATCCTCAACATATCTAACAACATGCTCAATGGAAACCTTACTTGGAAATTCTCAAACCTCAAAGAGCTTGAGGCTTTTGATGCTTACAACAATGAGTTCAATTCTTCACTTCCTCTTGGAGTCACTGAGTTACATAGTCTTAAGTACTTGAATCTCGGCGGAAACTTTTTCCATGGAGAGATTCCTGCAAGATATGGAAAGATGATGAGTTTGAAATATCTGTCTCTTGCAGGTAATGATTTGAGAGGCTTCATACCTTTTGAGATTGGAAATCTTAGTGGTTTGACACATCTTTTTTTAGGTTATTACAATGAGTTTGAAGGTAGAATTCCAAAAGATTTTGGTAATCTTGTTAGTTTGGTTCATCTTGATCTTGCTAACTGTGGTTTGAAAGGTGAAATTCCACATGAGTTAGGTGAACTTTACAAACTAGACACACTTTTCTTGCAGACCAATCAACTTAGTGGTTCGATTCCTTCGGAATTAGGGAATTTAACTAGTTTGAAATCTCTTGATTTGTCGAACAACGAGTTGATTGGAAACATACCGAATGAGTTTTCGAATCTTCGTGAACTCACACTCTTGAATTTGTTCATCAACAAACTCTATGGTGTGATTCCATCTTTTGTTTCTGAGTTACCGAATTTGGAAGTGTTGAAGCTTTGGCAGAACGGTTTCGAGGGTTCTATTCCTTCGAAGCTTGGAGAGAATGGTAGATTGATCGAGCTTGATTTATCGACGAACAAGCTCGCCGGGCTAGTTCCTAGATCTTTATGCATTGGAAAAAAGCTCAAGATTTTGATTTTACTCAACAATTTTCTGGTTGGTTCTTTGCCTAATGAACTTGGTGAATGTTACACGCTTCAAAGAGTTCGTTTAGGACGAAACTATTTAACAGGTTCGATACCGAATGGTTTTCTCTATTTGCCTGAAATTTCACTTCTTGAACTACAGAACAATTTTCTCAGTGGCTTTCTTGCACAGCAAGAAATCACAAACACAAACAGTTCTAAACTCGGAGAGATGAATCTGTCGAACAATCGTTTCTCCGGATCTCTCCCGAGTTCTATTGGATATTTTCCGAATTTGCAGATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATTCCTCAAGATATAGGAAAGCTGAAGAACATTCTAAGGTTGGATATGAGTTTCAACAATTTTTCAGGAAAAATTCCTATTGAGATAGGTGAATGTTTTTCACTTACCTATTTAGATTTGAGTCAGAATCAATTATCAGGTCCTATTCCAATTCAGGTTTCACAGATTCACATACTTAACTATCTTAATGTGTCATGGAACAATCTAAACCAAACACTCCCTAAGGAACTTGGTTCTATTAAGGGCTTAACTTCTGCTGATTTCTCTCATAACAACTTCTCTGGCTCAATTCCTGAAATAGGACAATTCTCGATGTTCAATTCTACTTCCTTTATCGGTAATCCGAAGTTATGTGGATACGATACGAATCCATGTAACCGTTCTTCATCAGAAACATCCGAGTCTCCGAATCAAGAAAACGGCCCTACGAAACGTGGAATTCTGGTAAAGTATAAGCTTCTATTTGCATTAGCACTTTTGGTTTGTTCGTTGGTTTTCGCAACGTTTGCTATAACCAAAAGTCGAAAAGGAATTCGAAAGGACTCGAATTCATGGAAGTTAACAGCATTTCAGAAGATTGACTATGGAAGTGAAGACATCTTAGGTTGTGTAAAAGAGAGTAACATCATAGGAAGAGGTGGAGCAGGTGTTGTATATGGAGGAACAATGCCGAATGGAGAAAAAGTAGCTGTGAAAAAGTTGTTAGGAGTTAACAAAGGTAGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAATAAGGCATAGATACATTGTGAAGTTGTTGGCATTTTGTTCAAATGGAGACACAAATTTGCTTGTTTATGAGTATATGACAAATGGTAGTTTAGGTGAAGTGTTGCATGGAAAAAGAGGGGGGTTTCTTGAGTGGAAAGTTAGGGTGAAAATAGCAAGTGAAGCTGCTCAAGGACTTTGCTATTTGCACCATGATTGTTGTCCTTTGATAGTTCATAGAGATGTTAAGTCAAATAACATTTTGTTGGATTCTGAATTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAATTTTTGTTGCAAGAGAATAATGGTGGAACTTCTGAATGCATGTCTTCTATTGTTGGTTCTTATGGATACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAGAGTGATGTATATAGCTTTGGAGTGGTGTTACTAGAGCTATTGACAGGGAGAAGACCAGTGGGAGATTTTGGTGAAGATGGAGTGGATATTGTTCAATGGACAAAGTTACAAACTGATTGGAACAAAGAAAGTGTGGTGAAGATTCTTGATGGAAGGTTACATCAAATTCCTATAGAGGAAGCAATGCATATATTCTTTGTGGCTATGTGTTGTGTTGAAGAGCAAAGTGTGGAAAGACCAACTATGAGGGAAGTTGTTGAGATGCTAGCACAAGTAAAGCAACCAAATATCTTTCATGTGTAG 2910 0.3718 MNIPMSSFTFLLYTLFLFSTLSLSSSLPLSLKTQASILVSLKQDFHSKTSLKTWNISNYMSLCTTWYGIQCDTNNTSVVSLDISNLNVSGTFSSSITKLSTLRILNISNNMLNGNLTWKFSNLKELEAFDAYNNEFNSSLPLGVTELHSLKYLNLGGNFFHGEIPARYGKMMSLKYLSLAGNDLRGFIPFEIGNLSGLTHLFLGYYNEFEGRIPKDFGNLVSLVHLDLANCGLKGEIPHELGELYKLDTLFLQTNQLSGSIPSELGNLTSLKSLDLSNNELIGNIPNEFSNLRELTLLNLFINKLYGVIPSFVSELPNLEVLKLWQNGFEGSIPSKLGENGRLIELDLSTNKLAGLVPRSLCIGKKLKILILLNNFLVGSLPNELGECYTLQRVRLGRNYLTGSIPNGFLYLPEISLLELQNNFLSGFLAQQEITNTNSSKLGEMNLSNNRFSGSLPSSIGYFPNLQILLLHGNRFSGEIPQDIGKLKNILRLDMSFNNFSGKIPIEIGECFSLTYLDLSQNQLSGPIPIQVSQIHILNYLNVSWNNLNQTLPKELGSIKGLTSADFSHNNFSGSIPEIGQFSMFNSTSFIGNPKLCGYDTNPCNRSSSETSESPNQENGPTKRGILVKYKLLFALALLVCSLVFATFAITKSRKGIRKDSNSWKLTAFQKIDYGSEDILGCVKESNIIGRGGAGVVYGGTMPNGEKVAVKKLLGVNKGSSYDNGLSAEIKTLGRIRHRYIVKLLAFCSNGDTNLLVYEYMTNGSLGEVLHGKRGGFLEWKVRVKIASEAAQGLCYLHHDCCPLIVHRDVKSNNILLDSEFEAHVADFGLAKFLLQENNGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEDGVDIVQWTKLQTDWNKESVVKILDGRLHQIPIEEAMHIFFVAMCCVEEQSVERPTMREVVEMLAQVKQPNIFHV* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0457 969 SUPERFAMILY Protein kinase-like (PK-like) 679 958 IPR011009 -
Psa2g0457 969 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Psa2g0457 969 Gene3D Ribonuclease Inhibitor 266 341 IPR032675 -
Psa2g0457 969 Gene3D Ribonuclease Inhibitor 189 265 IPR032675 -
Psa2g0457 969 SMART LRR_typ_2 463 487 IPR003591 -
Psa2g0457 969 SMART LRR_typ_2 268 291 IPR003591 -
Psa2g0457 969 SMART LRR_typ_2 316 340 IPR003591 -
Psa2g0457 969 SMART LRR_typ_2 220 244 IPR003591 -
Psa2g0457 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Psa2g0457 969 Gene3D Phosphorylase Kinase; domain 1 677 760 - -
Psa2g0457 969 Gene3D Transferase(Phosphotransferase) domain 1 761 966 - -
Psa2g0457 969 Gene3D Ribonuclease Inhibitor 342 608 IPR032675 -
Psa2g0457 969 Pfam Leucine Rich Repeat 270 292 IPR001611 GO:0005515
Psa2g0457 969 Pfam Protein kinase domain 685 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0457 969 SMART serkin_6 683 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0457 969 ProSiteProfiles Protein kinase domain profile. 683 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0457 969 PANTHER UNNAMED PRODUCT 9 102 - -
Psa2g0457 969 PANTHER UNNAMED PRODUCT 87 966 - -
Psa2g0457 969 ProSiteProfiles Leucine-rich repeat profile. 270 292 IPR001611 GO:0005515
Psa2g0457 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 87 966 - -
Psa2g0457 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 9 102 - -
Psa2g0457 969 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Psa2g0457 969 SUPERFAMILY L domain-like 42 357 - -
Psa2g0457 969 SUPERFAMILY L domain-like 303 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0457 Psa-Chr2 19387278 19390796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0457 22 963 Receptor kinase-like Gene Family AT5G65700 55.407 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa2g0457 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0457 - - gmx:100816158 1407.51