Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0406 ATGGTAGTGAAGGTGTATGGTCCTCAATGTGCCTCAGCCAAACGGGTTCTGGTTTGTCTGATTGAGAAGGAAATTGAATTTGAGGTTGTCCCTGTTAATGTCTTGACGGGAGAACACAAAGATCCTCAGTACCTCAAATTACAGCCTTTTGGAACTGTTCCTGTCATTCAAGATGGAGACTATACCCTTTATGAATCTCGAGCTATAATGAGATACTATGCTGAAAAATACAGATCTCAAGGAGTTGAGTTACTTGGAAAAACAATAGAAGAAAAGGGTCTTATAGAGCAATGGTTAGAAGTTGAGGCACATAGCTATAATCCACCAGCATACAACTTGACGGTTCATGTTTTGTTTCCTGCACTAGCAGCTAGCAAGACTTCGGATCCTAAGGTGATTGAAGAGAGTGAGGCAAAGCTTGGGAAGGTGTTGGACATTTATGAAGAGAGGCTTTCAGAGAGCAAGTATTTGGCTGGTGATTTTTTCAGTCTTGCTGATTTGAGTCACCTTCCTTTTACTGATTATATTGTTAATAATATGGGGAAAGAGTATTTGATTAAGGATAGGAAACATGTTAGTGCTTGGTGGGATGATATAAGTAGTAGACCGTCGTGGAAGAAGGTTCTTGAGTTGTATAAACCTCCCATTTAA 651 0.3994 MVVKVYGPQCASAKRVLVCLIEKEIEFEVVPVNVLTGEHKDPQYLKLQPFGTVPVIQDGDYTLYESRAIMRYYAEKYRSQGVELLGKTIEEKGLIEQWLEVEAHSYNPPAYNLTVHVLFPALAASKTSDPKVIEESEAKLGKVLDIYEERLSESKYLAGDFFSLADLSHLPFTDYIVNNMGKEYLIKDRKHVSAWWDDISSRPSWKKVLELYKPPI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0406 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 216 - -
Psa2g0406 216 CDD GST_N_Phi 2 76 - -
Psa2g0406 216 SUPERFAMILY GST C-terminal domain-like 72 214 IPR036282 -
Psa2g0406 216 CDD GST_C_Phi 90 209 IPR034347 -
Psa2g0406 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Psa2g0406 216 Gene3D Glutaredoxin 1 85 - -
Psa2g0406 216 SFLD Main (cytGST) 4 202 - -
Psa2g0406 216 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Psa2g0406 216 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 2 216 - -
Psa2g0406 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Psa2g0406 216 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Psa2g0406 216 Gene3D - 86 209 - -
Psa2g0406 216 Pfam Glutathione S-transferase, C-terminal domain 117 203 IPR004046 -
Psa2g0406 216 SUPERFAMILY Thioredoxin-like 6 81 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0406 Psa-Chr2 16940831 16942437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0406 1 216 Glutathione S-transferase Gene Family AT2G30870 59.722 3.70e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0406 K00799 - gmx:547951 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4555 5 401945839 401947208 Psa2g0406 2 16940831 16942437 PCT