Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0392 ATGTCATCAAATGATTCGTTGAATGTTGAGTTATCGAAGAAGACATCAGTTTTGGGTTTGAAAAGATGGGTTTTGATTGGGATAGGTGTTGGAGTATTTATAGTGCTGATTCTTTGTATATTGTCTGTATGGGTGATGTTTCGGAGGAAGTCTAGGAGTAGGAGATCTCTCGACAAGCCCCAAATACCGAATGTGTCGAAAGATATCAATGTTGACATTGTCGGGGTGCAGAATTCTCATGTTCAATATGGAGATGTGTTTGTTCCTAATGATAGTAATTTGGACAAGATGTCGGTTCGTATGAAGACGGGCAAATTCAGTGATCCTGATAGTGTTAGTCAGTGCAGCTCGGTTTATCATCACGAGAGAGGATTAAGTTCACTGTCATGGGAAGAAGGGAGCTCCGGGAATTTCAAGAAGCGATCTACATTGTCGTATGGAGGAGGGCCAACAACCACCTCTCCTTTGATTGGCTTGCCAGAATTTTCGCATCTTGGGTGGGGTCACTGGTTTACACTTAGAGATCTTGAACAAGCAACTCATTATTTTTCGAAGGATAACATTGTCGGCGAGGGTGGATATGGAGTTGTTTACAGGGGCAGGCTGATCAATGGGACCGATGTTGCCGTGAAGAAACTTCTTAACAACCTGGGACAAGCAGAGAGAGAATTCCGGGTTGAAGTGGAAGCTATAGGCCATGTTAGACATAAGCATCTCGTGCGCTTACTTGGATATTGCGTAGAAGGAGTTCACAGGCTGCTGGTGTATGAATACGTGAACAACGGTAACTTAGAACAGTGGTTACACGGAGACAAACTTGGAACACTTACCTGGGAGGCCCGCATGAAAGTTATTCTCGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCAATAGAACCGAAAGTTATTCACCGAGATATAAAGTCCAGCAATATATTGATCGACAAGGAGTTCAATGCGAAAGTTTCTGATTTCGGTTTGGCCAAACTTTTGGAATCAGGAGAAAGTTACATAACTACTCGAGTAATGGGAACGTTTGGCTATGTAGCACCAGAGTATGCCAACAGCGGTTTGTTAAACGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTGCTTGAAGCCGTTACCGGAAGGGACCCTGTAAATTATTCGCGTCCTTCTGATGAGGTTAATCTTGTTGAGTGGCTCAAGATAATGGTGGGGGCAAGGAGAGCCGAGGAAGTTGTGGATTTGAGACTCGAAGTTAAACCATCTGCGCGTGCTTTAAAGCGTTCGCTTCTGGTCGCTCTTAGATGTATTGATCCCGATGCAGAAAAAAGGCCCAAAATGAGTCATGTTGTTAGGATGCTTGAAGCCGACGAATATCCATTTCGAGAGGATCGAAGGAATAGAAAAAGCGCGACTACCACCAGCTTGGAGATTGAAACAGTCAATGATATTGTCGGTCCATCGGATGCTGAAAAAGCAGTACAATCTAAGAGCCATGCGCCCGAAACAGCTTGA 1509 0.4433 MSSNDSLNVELSKKTSVLGLKRWVLIGIGVGVFIVLILCILSVWVMFRRKSRSRRSLDKPQIPNVSKDINVDIVGVQNSHVQYGDVFVPNDSNLDKMSVRMKTGKFSDPDSVSQCSSVYHHERGLSSLSWEEGSSGNFKKRSTLSYGGGPTTTSPLIGLPEFSHLGWGHWFTLRDLEQATHYFSKDNIVGEGGYGVVYRGRLINGTDVAVKKLLNNLGQAEREFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDKLGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDKEFNAKVSDFGLAKLLESGESYITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVNYSRPSDEVNLVEWLKIMVGARRAEEVVDLRLEVKPSARALKRSLLVALRCIDPDAEKRPKMSHVVRMLEADEYPFREDRRNRKSATTTSLEIETVNDIVGPSDAEKAVQSKSHAPETA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0392 502 SUPERFAMILY Protein kinase-like (PK-like) 163 454 IPR011009 -
Psa2g0392 502 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Psa2g0392 502 CDD STKc_IRAK 189 453 - -
Psa2g0392 502 Gene3D Transferase(Phosphotransferase) domain 1 259 470 - -
Psa2g0392 502 SMART serkin_6 183 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0392 502 ProSiteProfiles Protein kinase domain profile. 183 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0392 502 PANTHER OS01G0323000 PROTEIN 2 501 - -
Psa2g0392 502 Pfam Protein kinase domain 184 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0392 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Psa2g0392 502 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Psa2g0392 502 Gene3D Phosphorylase Kinase; domain 1 165 258 - -
Psa2g0392 502 MobiDBLite consensus disorder prediction 462 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0392 Psa-Chr2 16244409 16249155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0392 147 455 Trihelix Transcription Factor Family AT1G70460 49.045 1.87e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Psa2g0392 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0392 - - gmx:100778444 776.163