Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0385 ATGGTTAGGAAGAGGAGAACCGACGGACCTGGTGGTGAAAGCTCTGGCGGTCAACACCCTGCCGAGAGGAGTGTTCCCCCTCAACAACAGGCTGCTGTGTCTGGAGGCGGAGGACCCCAAGGAGGGCGAGGCCGGGGTCCCCAAGGTGGACGTGGGGGTTATGGAGGTCGTGGGATGCCCCAACAACAACATGGTGCCCCTCCTGAGTACCAAGGAAGAGGTAGGGGAGGACAGTATGGTGCCCCCTCTGATTATCAAGGAAGAGGTAGGGGAGGACAGTATGGTGCCCCCTCCGATTATCAAGGAAGGGGTAGAGGAGGACCTCCCCAGCCCCAACAGCAGTATGGTGGCCCACCTGAGTATCAAGGCAGAGGCAGGGGAGGGCCTTCTCAGCAAGGAGGTCGTGGATATGGCGATGGCCGAGGTGGATATGGTGGTGGCCATGATACAGCTCCTTCTTATGGAGGCCCCGTCAGGCCACCAGCACCCGAACTGCACCAAGCTACCTCAGTTCCTTCTGTGCCGTATCCAGTTGCGGTGTCTCCTCCACCTGCACCGAGTGAGGCAAGTTCATCTTCGCATCCACAAGTGTCTGAAGTGGAACAGGATCTGGGACAGGTGACAATTCATTCTGAAGAGACTCCCGCTCCTCCGCCTGCAAGTAAATCATCACTGAGGTTTCCCCTTCGACCTGGAAAAGGGAAGATTGGCAAGAAGTGTGTTGTTAAGGCGAACCACTTCTTTGCTGAGTTGCCAAAGAAAGACCTGCATCAGTATGATGTGACAATTACTCCGGAAGTGACTTCTAGAGGTGTGAACCGAGCTGTTATGGCGCAGCTTGTGAAATTGTATCGGGATTCTCACCTGGGAAAGAGACTTCCGGCTTATGATGGCCGTAAGAGTCTCTATACAGCAGGGCCACTTCCTTTTATTTCAAAGGACTTTAGAATCACCCTGGTTGATGAAGATGACGACGGATCAAGAGGGAAGAGGAGGGACAGGGAGTTTAAAGTTGTTATTAAATTTGCTTCACGTGCTGACCTTCACCACCTGGGTCTCTTTTTGGAGGGGAGGCAAACTGATGCACCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTCCGGGAGCTTCCTACAAGCAGGTATTGTCCAGTGGGAAGATCATTTTATTCCCCTCTTCTAGGTATAAGGCAGCCTTTAGGTGAGGGGTTGGAAAGTTGGCGAGGATTTTATCAAAGTATTCGTCCTACTCAAAATGGACTGTCTCTGAACATTGATATGTCTTCAACTGCATTTATTGAGCCACTGCCTGTGATAGAGTTCGTTGCCAAGTTGCTGAATAGGGAAGTCTCACCCAGGCCTCTGGCTGATGCTGATCGGGTGAAGATAAAAAAAGCACTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGCAACATGAGGAGAAGATATCGTATTTCTGGTTTGACTTCACAAACTACCAGAGAGCTGACATTCCCTGTGGATGAGAGTGGGACTATGAAGTCTGTTGTTGAGTATTTCTCTGAGACATATGGTTTTGTCATTCAACATACTCAGTGGCCTTGTTTGCAAGTGGGCAACCCTCAGAGACCAAACTACCTTCCAATGGAGGTCTGCAAAATTGTCGAGGGGCAAAGGTACTCGAGACGATTGAATGAGCGACAAATTACCGCCCTGCTCAAAGTCACATGCCAACGTCCACCAGATAGGGAAAATGACATCACACAGACAGTACGTCATAATGCCTATCATGAAGATCCTTATGCGAAAGAGTTTGGAATCAAAATCAGTGATAAGCTTGCTCAAGTCGAAGCTCGCATCCTTCCTGCACCATGGCTCAAATATCATGATACGGGTAGAGAAAAGGATTGTCTACCCCAAGTTGGGCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGAACAGTTAACAACTGGTTCTGCGTAAACTTTTCTAGGAGTGTGCCAGACAAATCTGCACATGCCTTTTGTTGTGAGCTTGCAAATATGTGTCACATATCTGGCATGGCATTTAATCCTGAACCAGTACTTCCTCCACTTAGTGCTCGTCCTGACCAAGTAGAGAAGGTTCTCAGAAGGCGCTATCATGATGCCAAGACCAAGCTGCAGGGAAAGGAGCCTGACTTGCTCATTGTCATTTTGCCTGATAATAATGGTTCTCTTTATGGTGACCTCAAGCGTATTTGTGAGACTGACCTGGGGGTTGTTTCCCAGTGTTGTTTGACTAAACATGTTTTTAAGATGAACAAGCAGTACCTTGCAAATGTTTCATTGAAAATTAATGTTAAAGTTGGGGGTAGGAATACTGTGCTTGTTGACGCACTTTCACGACGCATTCCTATAGTCAGTGACAGACCTACTATCATTTTTGGAGCTGATGTGACTCATCCTCACCCTGGGGAGGATTCAAGTCCATCAATAGCAGCTGTTGTTGCTTCTCAAGATTGGCCAGAAATCACCAAGTATGCAGGTTTGGTTTGTGCCCAAGCACATCGGCAAGAATTGATTCAAGACCTTTTCAAACAATGGCAAGATCCAGTCAGAGGAACACTGACTGGTGGAATGATCAAGGAACTTCTTATATCATTCCGGAGAGCAACTGGTCAAAAACCTCAGCGCATCATATTTTACAGAGATGGAGTTAGCGAAGGGCAATTTTACCAAGTCCTGCTATTTGAGCTTGATGCAATCCGGAAGATATGCGAGATGCACCCGTTCTGTTTCAATTGTGCCCCCTGCTTATTATGCTCATTTGGCTGCATTCCGGGCAAGGTTCTATATGGAACCTGA 2835 0.4804 MVRKRRTDGPGGESSGGQHPAERSVPPQQQAAVSGGGGPQGGRGRGPQGGRGGYGGRGMPQQQHGAPPEYQGRGRGGQYGAPSDYQGRGRGGQYGAPSDYQGRGRGGPPQPQQQYGGPPEYQGRGRGGPSQQGGRGYGDGRGGYGGGHDTAPSYGGPVRPPAPELHQATSVPSVPYPVAVSPPPAPSEASSSSHPQVSEVEQDLGQVTIHSEETPAPPPASKSSLRFPLRPGKGKIGKKCVVKANHFFAELPKKDLHQYDVTITPEVTSRGVNRAVMAQLVKLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDFRITLVDEDDDGSRGKRRDREFKVVIKFASRADLHHLGLFLEGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPLLGIRQPLGEGLESWRGFYQSIRPTQNGLSLNIDMSSTAFIEPLPVIEFVAKLLNREVSPRPLADADRVKIKKALRGIKVEVTHRGNMRRRYRISGLTSQTTRELTFPVDESGTMKSVVEYFSETYGFVIQHTQWPCLQVGNPQRPNYLPMEVCKIVEGQRYSRRLNERQITALLKVTCQRPPDRENDITQTVRHNAYHEDPYAKEFGIKISDKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCVNFSRSVPDKSAHAFCCELANMCHISGMAFNPEPVLPPLSARPDQVEKVLRRRYHDAKTKLQGKEPDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVSLKINVKVGGRNTVLVDALSRRIPIVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKICEMHPFCFNCAPCLLCSFGCIPGKVLYGT* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0385 944 Pfam N-terminal domain of argonaute 238 374 IPR032474 -
Psa2g0385 944 MobiDBLite consensus disorder prediction 185 201 - -
Psa2g0385 944 Gene3D paz domain 429 554 - -
Psa2g0385 944 MobiDBLite consensus disorder prediction 21 35 - -
Psa2g0385 944 Pfam Argonaute linker 2 domain 576 622 IPR032472 -
Psa2g0385 944 Pfam Glycine-rich region of argonaut 116 214 IPR024357 -
Psa2g0385 944 Gene3D - 614 787 - -
Psa2g0385 944 ProSiteProfiles PAZ domain profile. 436 550 IPR003100 GO:0005515
Psa2g0385 944 SMART PAZ_2_a_3 440 572 IPR003100 GO:0005515
Psa2g0385 944 Pfam PAZ domain 461 565 IPR003100 GO:0005515
Psa2g0385 944 SMART DUF1785_2 383 435 IPR014811 -
Psa2g0385 944 Pfam Piwi domain 725 918 IPR003165 GO:0003676
Psa2g0385 944 Pfam Argonaute linker 1 domain 384 434 IPR014811 -
Psa2g0385 944 Gene3D - 793 928 IPR036397 GO:0003676
Psa2g0385 944 Pfam Mid domain of argonaute 633 708 IPR032473 -
Psa2g0385 944 MobiDBLite consensus disorder prediction 1 201 - -
Psa2g0385 944 CDD PAZ_argonaute_like 435 549 - -
Psa2g0385 944 SUPERFAMILY Ribonuclease H-like 710 921 IPR012337 -
Psa2g0385 944 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 124 917 - -
Psa2g0385 944 SUPERFAMILY PAZ domain 241 587 IPR036085 GO:0005515
Psa2g0385 944 ProSiteProfiles Piwi domain profile. 724 917 IPR003165 GO:0003676
Psa2g0385 944 PANTHER PROTEIN ARGONAUTE 1A 124 917 - -
Psa2g0385 944 SMART Piwi_a_2 724 942 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0385 Psa-Chr2 15509029 15515281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0385 120 916 Eukaryotic Initiation Factors Gene Family AT1G48410 76.712 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0385 K11593 - gmx:100778754 1369.37