Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0382 ATGGCTAATGAAAATCATGATCTTTTCTATCATCACAACAACCACCACCATGATGATGATGAACTCAATCCCTCCAACTTTTCATTCTCACAAAACTTTCAAGGATTTGATCTTTCCACTACTCCTACTACAACTTTCACTGACTACTTACATGGTTCCATGGACTATAACACTCTCTCAAAAGCCTTTGACTTGTCTTGTTCATCATCTGAAGTTGTTTCCTCCATCAATGATAACAACATGAAGAAATCTAGTGCAGGAGATTCTGAATCATCTTCATCTAATGAAGCTGAAGCTGTGATAGAACAAGACTCAACTAAAATGGAAAAGAAAGATAAGCATCCAAAATTAGGGTCCCAAGATGGAGATGAAAATTCTAAAAAAGAGAACAAGGTTAAAAAGAAAGAGAAAAAACCAAAAGAACCAAGGTTTGCATTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGTTATAGATGGAGAAAATACGGACAAAAAGCAGTCAAAAATAGTCCATATCCAAGGAGTTACTATAGATGCACAAGTCAAAAGTGTATAGTGAAGAAAAGAGTGGAAAGGTCATACCAAGATCCATCAATTGTGATGACAACATATGAAGGACAACACAACCATCATTGTCCAGCAACACTTAGAGGCAATGCAGCTTCCAACATCTTTTCATCACCATCTCTCTTTGGTTCCAACTCAATTCCATTGGAGCAAAGAATACATCAAGATTTCCTTGCTCAGTTTCTTCCAAGTTATAGCCAAAGTAATAATCATCAAATGTTCCACCAAAATGTTCCTCTACCACCTCATCAGCAACAGCAGTTTCAACTCCTTCACGACAATGGTTTGTTGCAAGATCTACTACCATCATCATTTCCAGGAAAACAAGAGCAATGA 909 0.3685 MANENHDLFYHHNNHHHDDDELNPSNFSFSQNFQGFDLSTTPTTTFTDYLHGSMDYNTLSKAFDLSCSSSEVVSSINDNNMKKSSAGDSESSSSNEAEAVIEQDSTKMEKKDKHPKLGSQDGDENSKKENKVKKKEKKPKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNAASNIFSSPSLFGSNSIPLEQRIHQDFLAQFLPSYSQSNNHQMFHQNVPLPPHQQQQFQLLHDNGLLQDLLPSSFPGKQEQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0382 302 MobiDBLite consensus disorder prediction 102 145 - -
Psa2g0382 302 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g0382 302 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g0382 302 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 29 296 - -
Psa2g0382 302 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g0382 302 MobiDBLite consensus disorder prediction 78 101 - -
Psa2g0382 302 Gene3D WRKY domain 139 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g0382 302 SUPERFAMILY WRKY DNA-binding domain 148 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g0382 302 MobiDBLite consensus disorder prediction 78 145 - -
Psa2g0382 302 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 296 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0382 Psa-Chr2 15407228 15409586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0382 1 220 WRKY Transcription Factor Family AT4G18170 48.760 2.13e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g0382 WRKY 6e-25 CL0274