Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0378 ATGCAAGAGCCTCTTCTCACTAATGGAGAAACACATTCACCAAGTATACCATTACTCAAGGAACAATCTTTCCATGATCCTGCTCCTTCCCCGTCACTGCTTCAATCAGGTTCTCATATCATCAATGAATCCAAACACCCTTCTTTTATTAACCTCATAGCCAACTTGAGCATCGCGAAAACGAAGATCATTCACCGCTCTCGTTCTGCTCCGTCCATTTTATTCACTGACATGAAGGTAGATTTTCATGAGCCATTTGAAAACAGACCTGCGTATAAGTCATCGGCTTTACTTGTGAGGCTGTGTTTCATTATTGTTTTATTCTATGTGGCTGTTGGTGTAACGATGTACATGATAAGTGGGAGTTTTAAGGGAACTACTACATTTAGACCTGTAGATGCTGTGTATTTTGCAGTGGTAACTCTGTCCACTATTGGATACGGAGATATCGTTCCAGATACCATATTTGCGAAGATGTTTACATGTTGTTTCATTTTGGTTGGTTTTGGATTCATCGGTTTTATGCTTAATGAGTTAGTAGTATACATTTGTGATACACACGAGGCGTTTTTATTGAGCATGATGGATGAGAATAGATACAAGAAAATTCTGACGACTTACATGGTTGATGAAGAGAAAGGAAGAATGAGGATAAGAATGAAAGTTTGTGTTGCTTCGATTGTTGTTATTGTCTGCATTGCTATTGGAACGATTACAGCACATTTTGTAGAGGATCTGAATTGGGCTGACAGTTTTTATCTTTCGATTACTTCTGTCACAACGGTTGGTTATGGAGATTTTTCTTTCAAAACATTAGCTGGAAGATGTTTCGCGATTCTGTGGCTTTTGGTAAGCACGTTGGCAGTTGCGAGGGCGTTTTTGTACCTCACTGATTATAGTCTGCAAAAGAGAAGCCGCGAGATGGCGAAAAGGGTTCTTGAAAAGAAGATAACTTTGTCGGATTTAGCAGCTGCAGATCTTGATAATGATGGATCAATCAGTAAATCGGACTTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTACTGAGATAGACATTCTACAAATTAGCAAACAATTTGATTCCTTGGACCATGGCATCTACGGCAAGATCACCTTAGCTGATCTCATGGAAACTGTATAG 1146 0.3927 MQEPLLTNGETHSPSIPLLKEQSFHDPAPSPSLLQSGSHIINESKHPSFINLIANLSIAKTKIIHRSRSAPSILFTDMKVDFHEPFENRPAYKSSALLVRLCFIIVLFYVAVGVTMYMISGSFKGTTTFRPVDAVYFAVVTLSTIGYGDIVPDTIFAKMFTCCFILVGFGFIGFMLNELVVYICDTHEAFLLSMMDENRYKKILTTYMVDEEKGRMRIRMKVCVASIVVIVCIAIGTITAHFVEDLNWADSFYLSITSVTTVGYGDFSFKTLAGRCFAILWLLVSTLAVARAFLYLTDYSLQKRSREMAKRVLEKKITLSDLAAADLDNDGSISKSDFVIYKLKQMGKITEIDILQISKQFDSLDHGIYGKITLADLMETV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0378 381 PRINTS Two pore domain K+ channel signature 140 168 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0378 381 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0378 381 SUPERFAMILY Voltage-gated potassium channels 198 315 - -
Psa2g0378 381 SUPERFAMILY Voltage-gated potassium channels 92 183 - -
Psa2g0378 381 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Psa2g0378 381 PANTHER OS01G0696100 PROTEIN 46 376 - -
Psa2g0378 381 Gene3D - 88 205 - -
Psa2g0378 381 Gene3D - 206 325 - -
Psa2g0378 381 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 46 376 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0378 381 Pfam Ion channel 104 181 IPR013099 -
Psa2g0378 381 Pfam Ion channel 227 298 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0378 Psa-Chr2 14943261 14944532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0378 64 379 Ion Channels AT4G18160 48.580 3.03e-105 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0378 K05389 - gmx:100789639 520.39