Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0376 ATGGAACACAAGCAAGAGCAAGACAGTGGTAACCAGAACAATATGTCTGGTAATGGTATTGATGTTAGTCTTATATCTCCTAAAGTTCCAAAATCGGTTTCGCCAGTTTCTTCTGCGGCCGAGGGGGAAACATTAAAGCGGCCTCGTGGCCGGCCGGCTGGATCGAAAAACAAGCCAAAGCCGCCGATTATTGTCACGAGAGATAGTGCTAATGCACTGAAAGCTCATGCGATGGAAGTGAGTTCCGGGTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGAAAGCAACGCGGTCTTTGTATACTTAATGGCACTGGTTGTGTAACGAATGTAACATTGCGCCAACCAGCTTCTTCTGGTGCAATTGTTACCCTTCATGGTCGATTTGAGATTCTCTCGTTGTTGGGGTCGATTCTTCCCCCGCCCGCACCCCCGGGAATCACTGGCTTGACGATTTACTTAGCAGGTGCTCAAGGACAAGTTGTTGGAGGTGCTGTAGTCGGTGCTTTGATTGCTTCAGGACCTGTTGTCATCATGGCTGCATCGTTCATGCATGCTACTTTCGATCGTCTGCCGCTGGAAGACGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGGCGCGCACAACATCATCTTGATATCTCTGACTTATATGCAATGCCGCAGAACCTCCTCATGAATAGTGCAATGCCTCCTGAGATATACTCTTGGGCGCCAGGGCGAAACTTGTCAAAAACCTGA 759 0.4822 MEHKQEQDSGNQNNMSGNGIDVSLISPKVPKSVSPVSSAAEGETLKRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRAQHHLDISDLYAMPQNLLMNSAMPPEIYSWAPGRNLSKT* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0376 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 202 - -
Psa2g0376 252 CDD DUF296 76 156 IPR005175 -
Psa2g0376 252 MobiDBLite consensus disorder prediction 1 64 - -
Psa2g0376 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 10 251 - -
Psa2g0376 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 251 IPR014476 GO:0003680
Psa2g0376 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 185 IPR005175 -
Psa2g0376 252 Gene3D - 72 217 - -
Psa2g0376 252 ProSiteProfiles PPC domain profile profile. 70 208 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0376 Psa-Chr2 14937818 14938576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0376 29 251 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.333 1.68e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0376 - - vra:106765118 386.726