Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0372 ATGCAGAAAGGAAAGAAATCAATGGAGATGGATTTCTTCTCGGAATATGGTGATGCCAACCGATATAAAATTCAAGAAGTAATTGGCAAAGGTAGTTATGGTGTTGTTTGTTCAGCCGTTGACACTCATACGGGTGAAAGCGTTGCAATTAAAAAGGTTCATGGCATCTTTGAGCATATATCCGATGCTGCACGTATTCTTCGTGAGATAAAGCTTCTCAGACTTCTTCGACATCCCGATATCGTTGAAATTAAGCACATTATGTTGCCTCCTTCAAGCAAAGACTTCAAAGATATTTATGTTGTTTTTGAGCTTTTGGAGTCTGATCTGCATCAAGTCATTAGAGCCAATGCCGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTACCAATTACTTCGAGCTTTGAAGTATATTCACACCGCAAATGTGTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGCGACACTCCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGTTCATTTTACTCAAAGTATACTCCGGCAATTGATATTTGGAGTATCGGATGCATCTTTGCCGAAGTATTAATTGGAAAACCACTTTTTCCTGGAAAAAGTGTTGTCCATCAGTTGGATCTAATAACGGATTTGCTTGGGACCCCCTCACTCGATGCTATATCTCGGGTACGCAACGATAAAGCAAGGAGATACTTAACAAGTATGAGGAAAAAACAGCCTGTATCATTTGCACAAAAATTTCCCAATGCGGATCCTTTATCACTACGACTACTCGAAAGGTTGCTTGCCTTTGATCCAAAAGACCGGCCTACTGCCGAAGAGGCATTAGCTCATCCTTACTTCAACGGACTGGCAAAAATTGAAAGGGAACCATCCTGCCAGCCGATTACACAAATGGAATTTGAATTTGAAAAGAGAAGAGTAACAAAGGGAGAAATTCGAGATTTAATTTTCCATGAGATTCTCGAGTATCATCCTCAACTAAATGGAACAGAGAAGACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCGAAAAGCAGTTCACTCATCTCGAGGAAACTGATGGTAAAAGTGATCCAGTTGTGCCACTCGAAAGAAAACACGCATCACTTCCGAGGTCAACAACAGTACATTCAAATATTGTTTCTAGCAAAAACCGGCAAACAACGGAAGAGAATAGTACTAGTTACGCAGAATCCAACAACATTCGGGGACTGCAAATAATTCCATTGGACACACCTGGTAAAGTTGTTAGACCACTTGTTCGGTACGGGCATGAGAGTATTGTCACCGATTCATATGATTCCAGGACGTCAATGAGAGGCAAAACATATCCAGCAATGATGAATCAAAACCGAAATAGCATCAGATTTAACCACAAGTATTGA 1488 0.3992 MQKGKKSMEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAVDTHTGESVAIKKVHGIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELLESDLHQVIRANADLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPSLDAISRVRNDKARRYLTSMRKKQPVSFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALAHPYFNGLAKIEREPSCQPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTEKTNFLYPSAVDQFEKQFTHLEETDGKSDPVVPLERKHASLPRSTTVHSNIVSSKNRQTTEENSTSYAESNNIRGLQIIPLDTPGKVVRPLVRYGHESIVTDSYDSRTSMRGKTYPAMMNQNRNSIRFNHKY* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0372 495 CDD STKc_TDY_MAPK 21 358 - -
Psa2g0372 495 Gene3D Phosphorylase Kinase; domain 1 37 359 - -
Psa2g0372 495 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 454 - -
Psa2g0372 495 ProSiteProfiles Protein kinase domain profile. 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0372 495 MobiDBLite consensus disorder prediction 406 431 - -
Psa2g0372 495 SUPERFAMILY Protein kinase-like (PK-like) 18 317 IPR011009 -
Psa2g0372 495 Gene3D Transferase(Phosphotransferase) domain 1 108 336 - -
Psa2g0372 495 MobiDBLite consensus disorder prediction 402 431 - -
Psa2g0372 495 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 454 - -
Psa2g0372 495 Pfam Protein kinase domain 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0372 495 SMART serkin_6 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0372 495 ProSitePatterns MAP kinase signature. 57 160 IPR003527 GO:0004707|GO:0005524|GO:0006468
Psa2g0372 495 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0372 Psa-Chr2 14722419 14728218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0372 3 429 MAP Kinase Gene Family AT2G42880 82.176 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa2g0372 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0372 - - gmx:100815293 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4290 5 354683191 354686046 Psa2g0372 2 14722419 14728218 PCT