Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0368 AGCTCTATGGGTGGCATGGTAAATCCGTCTTTCAGGGATACATGGACCGATGAATATGGGATAAATAGGCATTTTAATCCTAATCAGCGTAAGCTGCATAAGGAATGTCTTCAGCAGCAGCAGCAGGCTGAACGTCTTCAACAGCAGCAGCAGGCTGAACGGCTTCATCATCATCATCATCACCATAAATTCCCTCACCACCACTTTTCACTTTTCTCTATCAATTACTCTTGCTCTCAATTTCGTTCTTCGTCACACTCCTCCTCATCTCAATCTACTACATTAATGGACATCTTCAAAGCAATTGCTAAACAAGAAGTTGCAGCTCATGGTAGTGTTTCTATTAGAGACGATCAGAAGAGTTATAGTTACAATCAACTCATCTCATCGGCACAAAAGTTATCTAATCTCTTGTGTGAAAATGATGTGAAGGGAAATCTTGGAGGAACTCGAATAGGAATTGTAGCTAAGCTGTCTGCCGAATTTTCCTCCGAGAAGAGCAACAACGGACATTCAAAAAATGGAGAAAGTGATGCAGATAGAATTTTCCTGGAAAACATTGAAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGCGGGACAACAGGTAAACTTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAGCCTTGACAAAAGCATGGGAGTACACATCAGCTGACCGGTTTTTGCATTGTCTACCATTACATCATGTCCATGGACTTTTCAATGGTTTATTCGCCCCTCTCTACGTCGGTTCCACGGTTGAGTTTCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTTATCATGCCATGGATCCAGAGCTGCGAGCCACTTCTGCATCTAGCGCAAGGAACTTGCGTCTAATGATGTGTGGGTCCTCTGCACTTCCTCAACCTATTATGCAAGAATGGGAATCCATCACCGGACATCGCTTATTGGAGCGATATGGCATGACTAAAATTTTCATGGCACTGTCAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCATTACCTGAATATTATAAACTTCCTGAGGTAACGAAGGAATCGTTTACAGACGATGGATTCTTTAAGACTGGAGATGCTGTCACTACAGATAAAGATGGATATTTCATCATTTCAGGACGTAAGAACGCTGATATCATCAAGAACGTTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTAATAGTAGAGCATCCAAATGTCTCAGAATGTTGTGTTTTGGGAGTACCAAACAAAGACTACGGAGAAATTGTTTGTGCAATTATCGTGCCAGCCGCGAAGAGCGAAGAAAAGGCAAAACCTGCAACACTTCCACTCTGA 1377 0.4241 SSMGGMVNPSFRDTWTDEYGINRHFNPNQRKLHKECLQQQQQAERLQQQQQAERLHHHHHHHKFPHHHFSLFSINYSCSQFRSSSHSSSSQSTTLMDIFKAIAKQEVAAHGSVSIRDDQKSYSYNQLISSAQKLSNLLCENDVKGNLGGTRIGIVAKLSAEFSSEKSNNGHSKNGESDADRIFLENIERSSEDPALILYTSGTTGKLKGVVHTHRSILAQVQALTKAWEYTSADRFLHCLPLHHVHGLFNGLFAPLYVGSTVEFLPKFSVSGIWKRWRYHAMDPELRATSASSARNLRLMMCGSSALPQPIMQEWESITGHRLLERYGMTKIFMALSNPLKGERKAGTVGKPLPEYYKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIISGRKNADIIKNVGYKLSALEIESVIVEHPNVSECCVLGVPNKDYGEIVCAIIVPAAKSEEKAKPATLPL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0368 458 MobiDBLite consensus disorder prediction 36 62 - -
Psa2g0368 458 Pfam AMP-binding enzyme 355 395 IPR000873 -
Psa2g0368 458 Pfam AMP-binding enzyme 184 354 IPR000873 -
Psa2g0368 458 Gene3D - 163 392 IPR042099 -
Psa2g0368 458 PANTHER MALONATE--COA LIGASE-LIKE 170 278 - -
Psa2g0368 458 PANTHER MALONATE--COA LIGASE-LIKE 279 354 - -
Psa2g0368 458 PANTHER MALONATE--COA LIGASE-LIKE 81 163 - -
Psa2g0368 458 PANTHER MALONATE--COA LIGASE-LIKE 355 448 - -
Psa2g0368 458 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Psa2g0368 458 Coils Coil 29 49 - -
Psa2g0368 458 Gene3D - 398 456 IPR045851 -
Psa2g0368 458 SUPERFAMILY Acetyl-CoA synthetase-like 67 449 - -
Psa2g0368 458 Pfam AMP-binding enzyme C-terminal domain 409 446 IPR025110 -
Psa2g0368 458 PANTHER ACYL-COA SYNTHETASE 81 163 - -
Psa2g0368 458 PANTHER ACYL-COA SYNTHETASE 170 278 - -
Psa2g0368 458 PANTHER ACYL-COA SYNTHETASE 279 354 - -
Psa2g0368 458 PANTHER ACYL-COA SYNTHETASE 355 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0368 Psa-Chr2 14565279 14567127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0368 192 442 Monolignol Biosynthesis Gene Families AT4G19010 26.316 2.15e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0368 K18660 - gmx:100813324 449.514