Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0365 ATGGAAAATCTTACTGCTGCACAATCAACTCGAGTGTGCAATGTTCTTGCACTATTTCAGTGTGTGGCATCTCACTCTGATACAAAGATGTTATTTATCGAGGCTAAGATACCTTTGTATTTGTATCCCTTTCTTCAAACAACAAACAAGTTGCCACAATTTGAACATTTGAGGCTTGCTAGTCTTGGAGTCATTGGTGCACTTGTAAAGATAGCAACATTCATAATTCAAAAAGTTTTGGAAGATGATGATGGTTTGGCTTATATTTGCGCTACAGTAGAACGATTTTTTGCTGTAGCACGTGTTTTGGACACGGTGTTGAAAAGTATTGAGAAACAACATGCACCTCGACTTTTGAAGCTCATAATCTCATGTTATTCTCGGCTATCAGATAATCACAGAGCTGGAATTGCACTAACAAGTTGTCTTCCAAATGTTTTAACAAATGACACTTTCAATAATTACCTTCGTGAAGATCCAACAACTTGGAGGTTGGTGGAGCATTTGTATGAGAACATAGGGATGAATCATGTTCCATTAGTACCAGGTGGAGAATGA 558 0.3781 MENLTAAQSTRVCNVLALFQCVASHSDTKMLFIEAKIPLYLYPFLQTTNKLPQFEHLRLASLGVIGALVKIATFIIQKVLEDDDGLAYICATVERFFAVARVLDTVLKSIEKQHAPRLLKLIISCYSRLSDNHRAGIALTSCLPNVLTNDTFNNYLREDPTTWRLVEHLYENIGMNHVPLVPGGE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0365 185 Gene3D - 71 178 IPR011989 -
Psa2g0365 185 Gene3D - 1 70 IPR011989 -
Psa2g0365 185 Pfam Cell differentiation family, Rcd1-like 2 70 - -
Psa2g0365 185 Pfam Cell differentiation family, Rcd1-like 71 173 - -
Psa2g0365 185 PANTHER UNCHARACTERIZED 2 70 - -
Psa2g0365 185 PANTHER UNCHARACTERIZED 70 174 - -
Psa2g0365 185 PANTHER CELL DIFFERENTIATION, RCD1-LIKE PROTEIN 70 174 - -
Psa2g0365 185 PANTHER CELL DIFFERENTIATION, RCD1-LIKE PROTEIN 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0365 Psa-Chr2 14134973 14140952 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Psa2g0365 Rcd1 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0365 K12606 - ath:AT3G20800 214.157