Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0356 ATGAATTCCAATAAGCCTCAGTCTCGCTTCTCTCTAGTCAGACAATCCTCTCGGGCACCGGAGCGTGAGGACTCCGGCGCCGTCGACGTCGACTTCCCGGAATCGGTAGCGTTGAATCCGACGGTTCGATTGATGTATTTGGCCAACGAAGGTGACTTGGAAGCAATCAATGAGCTTTTAGACGACGGCTGTGACGTCAATTTCAGAGACATCGACGGCCGCTCCGCTCTCCATATCGCCGCATGTCAAGGCCGAACCGACGTCGTTCGGTTGTTGATTCAAAGAGGTGCTGAAGTTGATCCCCAAGATCGTTGGTGCAGCACTCCTCTTGCAGATGCGTTGTACTACAAAAATCATGATGTTGTCAAACTTTTGGAGCATCATGGTGCAAAACCCCCGGAGGCTCCTATGCATGTCCAGAATGCCCGTGAAGTCCCTGAATATGAGATTGATTCATCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAGTGCATTATGGGGTGGAATTCAAGTAGCTGTTAAAACTCTTGGGGAGGAAGTATTCACCGACGAGGATAAAGTAAAGGCATTTCACGACGAGCTTACATTACTTCAGAAAGCAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCCGTGACACAAAGCACTCCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTTCATGCCTACTTAAAGCGGAGAGGTGGATTAAAATCATCTACTGTTGTGAAGTTTGCACTTGATATTGCTAGGGGCATGAACTATTTGCATGAACATAAACCTGATCCCATAATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACAAAAACAGTCAAAGAAGACAAACCTGTGACATGCCAGGATACATCATGGCGGTATGTTGCACCTGAGGTTTACAGAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCTTTTGCTTTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAATGAAGTTCCTAAAGCATATGTGGATAGTGAGCGGCCACCGTTTAGGGCATCACCAAAGCGTTATGCTAATGGATTAAAAGAGCTAATTGAGGAATGTTGGGATGAAGAACCCTACAGAAGACCAACATTTAACAAAATAATAGAGAGGTTGGATAATATCAACCATCATCTTGCTCAAAAGAGGCGTTGGAAGGCTTTGACTCCTTCATGCATCTGGAGTTTGGAGGCCATGTTTAAGGGGTATCCTACGAATCCTGATAGCCGATCAGCTCGCTCTACGGTTAGATAA 1380 0.4464 MNSNKPQSRFSLVRQSSRAPEREDSGAVDVDFPESVALNPTVRLMYLANEGDLEAINELLDDGCDVNFRDIDGRSALHIAACQGRTDVVRLLIQRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEHHGAKPPEAPMHVQNAREVPEYEIDSSELDFTNSVCITKGTFRSALWGGIQVAVKTLGEEVFTDEDKVKAFHDELTLLQKARHPNVVQFLGAVTQSTPMMIVTEYLPQGDLHAYLKRRGGLKSSTVVKFALDIARGMNYLHEHKPDPIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYRKPENEVPKAYVDSERPPFRASPKRYANGLKELIEECWDEEPYRRPTFNKIIERLDNINHHLAQKRRWKALTPSCIWSLEAMFKGYPTNPDSRSARSTVR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0356 459 SUPERFAMILY Protein kinase-like (PK-like) 162 414 IPR011009 -
Psa2g0356 459 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Psa2g0356 459 SUPERFAMILY Ankyrin repeat 43 133 IPR036770 -
Psa2g0356 459 Pfam Protein tyrosine and serine/threonine kinase 173 414 IPR001245 GO:0004672|GO:0006468
Psa2g0356 459 MobiDBLite consensus disorder prediction 1 15 - -
Psa2g0356 459 PRINTS Tyrosine kinase catalytic domain signature 229 242 IPR001245 GO:0004672|GO:0006468
Psa2g0356 459 PRINTS Tyrosine kinase catalytic domain signature 268 286 IPR001245 GO:0004672|GO:0006468
Psa2g0356 459 PRINTS Tyrosine kinase catalytic domain signature 339 361 IPR001245 GO:0004672|GO:0006468
Psa2g0356 459 PRINTS Tyrosine kinase catalytic domain signature 385 407 IPR001245 GO:0004672|GO:0006468
Psa2g0356 459 ProSiteProfiles Protein kinase domain profile. 157 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0356 459 MobiDBLite consensus disorder prediction 1 28 - -
Psa2g0356 459 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 442 - -
Psa2g0356 459 Gene3D Transferase(Phosphotransferase) domain 1 151 423 - -
Psa2g0356 459 CDD STKc_MAP3K-like 163 414 - -
Psa2g0356 459 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Psa2g0356 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 442 - -
Psa2g0356 459 SMART ANK_2a 72 101 IPR002110 GO:0005515
Psa2g0356 459 SMART ANK_2a 38 68 IPR002110 GO:0005515
Psa2g0356 459 SMART ANK_2a 105 134 IPR002110 GO:0005515
Psa2g0356 459 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Psa2g0356 459 PIRSF ILK 2 436 - -
Psa2g0356 459 Gene3D - 4 147 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0356 Psa-Chr2 13709488 13715826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0356 1 429 MAP Kinase Kinase Kinase AT4G18950 64.815 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Psa2g0356 PK_Tyr_Ser-Thr 1.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0356 - - gmx:100795964 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0356 2 13709488 13715826 Psa5g1156 5 90338941 90346066 PCT