Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0342 ATGTCTATAGATATTTTCTATTTTCTTTCATGTGTTCTGTTTCCTCTGTTTGCTCTGTTCTTTCTCAATTTCTTGTGGCACAAGCAACAATGTAACAATCACCAAAAAAAGCTTCCACCAGGTGAAATGGGGTTTCCATTCATAGGTGAGACCATGAAATTCTTCAAAGCTCAAAGAAGAAACAAATTGTATGAAGAGTTTGTTCATCCTCGAGTCGCGAAACACGGAAAGATCTTCAAAACAAGGATCATAGGTTCACCAACTGTGATTGTGAATGGAGCTGAAGCCAACAAGTTTCTTCTATCCAATGAGTTTAAGCTGGTGAAAAGCTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAAGACTCAATCATGGAGAAAGATGGCGAACGGCATCGATTCCTTCGAGGCGTTATAGCAACTAGTCTTGGCTATGCAGGACTTGAAAGATTAGTTCCAAAACTATGCAACTTTGTTCAATTGTATTTATCTAAAAATTGGCGTGGTCGTGAAGAGATTAGTCTCTACCGTTCGACGAAAGTTCTTACGTTCAACATTGTTTTCGAGTGTTTGTTAGGGATCAATGTCGAGCCGGGTATGATAGATACATTTGAGAGAGTATTGGAAGGGGTTTTCTCTATAGGAATTAATTTTCCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACTTTTAAGATGCTTGCTCAGCATCATGATTGCTATGGTGAAGTTCTACGAGAACATGTTGATATAATGAGAAGTAAAAGAAGTGGTGAGAGTTTGAATGTAGATGACATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGTATGAGACTTTTCCCTCCAATATTTGGTTCTTTTAGGAAAGCAATTACTGATATTGAATATGAAGGATTCACTATACCTAAAGGATGGAAGATGCTATGGACAACCTATGGAACACATTACAATGAAGAGTATTTTAAGGATCCAATGAGTTTCAAACCAAGTAGGTTTGAGGAAGGAATACCACAATATGCATATGTTCCCTTTGGAGGAGGGCCAAGAGTTTGTGCAGGGTACCAATTAGCTAAGCTAAATATCCTCATTCTTGTGCATTATGTTGTGACACAATATGATTGGTTCTTAATCCATCCCAATGAAACAGTTTCAATGGATCCTCTACCCTTCCCTTCTCTTGGAATGCCAATTAGAATTTCTCCTAAGCATGTAGTAGAATAA 1236 0.3803 MSIDIFYFLSCVLFPLFALFFLNFLWHKQQCNNHQKKLPPGEMGFPFIGETMKFFKAQRRNKLYEEFVHPRVAKHGKIFKTRIIGSPTVIVNGAEANKFLLSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIATSLGYAGLERLVPKLCNFVQLYLSKNWRGREEISLYRSTKVLTFNIVFECLLGINVEPGMIDTFERVLEGVFSIGINFPAHDTTSFAVAMTFKMLAQHHDCYGEVLREHVDIMRSKRSGESLNVDDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKMLWTTYGTHYNEEYFKDPMSFKPSRFEEGIPQYAYVPFGGGPRVCAGYQLAKLNILILVHYVVTQYDWFLIHPNETVSMDPLPFPSLGMPIRISPKHVVE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0342 411 PANTHER CYTOCHROME P450 26 19 220 - -
Psa2g0342 411 PANTHER CYTOCHROME P450 26 219 406 - -
Psa2g0342 411 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 19 220 - -
Psa2g0342 411 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 219 406 - -
Psa2g0342 411 Pfam Cytochrome P450 39 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 Pfam Cytochrome P450 218 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS P450 superfamily signature 220 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 Gene3D Cytochrome P450 220 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 Gene3D Cytochrome P450 27 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g0342 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
Psa2g0342 411 SUPERFAMILY Cytochrome P450 34 406 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0342 Psa-Chr2 13254495 13256581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0342 187 312 Cytochrome P450 AT2G42850 53.175 2.39e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0342 - - atr:18443289 378.637