Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0338 ATGGAGCTTATTTTTATACTTCTCTTTTGTTCCACTTTCTTCTCACACTTTACTTCAGCTGCTACACCAAAGCTCAACACTCAAGAAGTGAAGGCATTGAAGGAGATAGGGAACAAGATTGGGAAGAAAGATTGGGATTTTGGAGTAGATCCTTGTAGTGGAAAAGGGAAATGGAATGTTTCTGAATCTGAAAATTGGAAAGGTTTTGAGAGTTCTGTGATTTGTGATTGTTCTTTCAAAAACAATTCTTCTTGCCATGTTGTAAGCATGTCCTTGAAGGAACAGAATCTTTCTGGCATTCTGTCGCCGGAGTTTTCCAAACTTCGTCATCTAAAAATATTAGACCTTAGTCGAAACATCATCACCGGTTCTATACCTCGACAATGGACTACAATGAACTTGGTTGAGTTATCTTTAATGGGAAACAGATTATCAGGACCATTCCCTAAAGTTCTAACCAACATTACAACTCTAAAAAATATGAGTATTGAAGGAAATCTATTTTCAGGCTTTATTCCGACGGAGATTGGAAATTTGATCAACTTAGAAAAACTCATCCTTCAATCAAACGCATTCACAGGAGCGTTACCGTCCGCGCTTTCCAAGTTGACCAAATTGAATGATTTGAGGCTGAGTGACAATAACTTCTTTGGGAAGATACCTGATTTCATTAGTAAATGGACAGTGATTGAAAAGCTGCACATCCAAGGTTGCTCTCTTGAGGGGCCTATACCTTCCAGCATTTCCGCACTGTCAAAATTGAGTGATTTGAGGATAACTGATTTGAGAGGTAGTAGAAGCTCTACTTTTCCACCACTAAATAATATGAAATCCATGAAGACACTAGTTTTGAGAAGATGCGCGATTAAAGGAGAGATCCCGGAGTATATCGGGGTAATGGAAAAACTGAAAATCTTAGATTTGAGTTTCAATAGCTTGAGTGGAAAGATACCTGACTCTTTTGCTGAGCTTGATAAAGTGGACTACATGTACCTTACTTCGAACAACTTATCAGGAACTATACCGGGCTGGGTCCTTGAAAATAACAAAAATATTGATATCTCTAACAATAACTTTGAATGGGAAAACTTAAGTCCAACCGAATGTCAACGAGGGAGCATAAACCTTGTCGAGAGCTACTCTTTATTATCGTCGAAGAAAAGTAACATTCATTCATGCCTAAAAAAGAACTTCCCGTGCTCGACGGATAAACCTCGTCGTTACTCCATGCGCATTAACTGCGGTGGTAGTGAAGCAAATGTTAGTGGTAGTATATACGAAGCAGACATAGAACGAAAAGGCGCTTCGATGTTATTTATCACTAACGGTTGGGCTCTTAGCAGCACAGGGGGCTTCATGGACAATGATATTGATTCTGATCCCTACACTGTGACCAATACTTCTAAACTTAATGTCTCTATGATCAACTCGAAACTCTACACAACAGCTCGTGTTTCGCCTCTTTCTCTCACATACTATGGCCTGTGTATGATAAATGGAATCTACACTGTCAAGCTTCACTTTGCAGAGATTATTTTCATCAATGATAGATCATTTAACAGTCTCGGGAAGAGGATATTCGACGTCTACATCCAGGGGAATTTGGTGCTGAGAGACTTCGATATCGAACGAGAAGCTGGTGGTACCGGAAAGCCAATTGTGAAGAAATTTAACGCAACTGTCACGCAAAATACTTTGAAGATTCAATTCTACTGGGCTGGAAAAGGAACCACCGGAATACCAACAAGAGGAGTTTATGGGCCTTCAGTTTCTGCTATTTCAGTGGATCCTAATTTTAAACCTCCATTAGAGCACGACGACAACAACAACAACCGAACCTATGTCATACTACTAACAGTTGGCATAGTCAGTGGTGTTTTAGTCGTTGTCCTCATTATGCTGGCTATCATGAGGAGGAAGGGATTGTTAGGAGGCAAGGATCCAGTTTATAAAGAGCTTCAAGGTATAGACCTGCAAACAGGATTGTTCACTTTAAAACAAATAAAAGTAGCTACCAAAAACTTCGATGCAGAAAATAAACTCGGCGAAGGAGGCTTTGGTTCTGTTTACAAGGGGCTACTATCAGATGGTACAGTAATTGCAGTAAAGCAGCTATCATCAAAATCTAAGCAAGGAAACCGCGAGTTCGTGAACGAGATAGGAATGTTATCTGGACTTCAGCATCCGAATCTTGTTAAGCTCCACGGATGTTGCGTCGAAGGGAACCAACTAATACTGATATATGAGTACATGGAAAATAATTGTCTATCCCGCATTCTCTTCGGGAAGGGATCAGACCGGAAAACGAAACTCGATTGGCTTACCAGGAAGAAAATTTGCCTTGGTATAGCTAAAGCTTTGGCTTATCTCCATGAAGAATCCAGAATTAAAATCATACATAGGGATATCAAGGCAAGTAATGTGTTGTTGGACAAAGATTTCAATGCAAAAATTTCAGATTTCGGTTTGGCAAAACTTATTGAAGACGACAAAACGCATGTCAGCACCCGGATTGCAGGAACAATCGGTTATATGGCACCTGAATATGCAATGCGTGGCTACTTAACCGACAAAGCAGATGTTTATAGCTTCGGCGTGGTTGCGTTGGAAACTATCAGCGGAAAGAGCAATACAAATTACAGGCCGGACGATGAATTTTTCTACCTTCTAGATTGGGCCTATGTTTTACAAGAGCGAGGAAGTCTTCTGGAGCTAGTCGATCCAGATATGGGTTCCGATTATTCAACCGAGGAAGCCATTGTAATGCTAAACGTAGCTCTCTTGTGTACTAATGCATCTCCTACACTTAGGCCAACAATGTGCCAAGTTGTGAGCATGCTCGAAGGTTGGACCGACATTCAGGATCTCCTTTCGGATCCGGGGTATTCGGCGGCTGGTTCAAGTTCAAAACATAAGAGCATAAGAAGTCACTTCTGGGAGAATCCAAGCAGATCACAAAGCATGTCAATACCTACTATTTATACCGATTCCTCTGGCTCACATGTTGAAACAGAAGAGAGCAAAAGTCTTGTAAAAATTAACTCAGTTGGATCAGACAAATGA 3063 0.4061 MELIFILLFCSTFFSHFTSAATPKLNTQEVKALKEIGNKIGKKDWDFGVDPCSGKGKWNVSESENWKGFESSVICDCSFKNNSSCHVVSMSLKEQNLSGILSPEFSKLRHLKILDLSRNIITGSIPRQWTTMNLVELSLMGNRLSGPFPKVLTNITTLKNMSIEGNLFSGFIPTEIGNLINLEKLILQSNAFTGALPSALSKLTKLNDLRLSDNNFFGKIPDFISKWTVIEKLHIQGCSLEGPIPSSISALSKLSDLRITDLRGSRSSTFPPLNNMKSMKTLVLRRCAIKGEIPEYIGVMEKLKILDLSFNSLSGKIPDSFAELDKVDYMYLTSNNLSGTIPGWVLENNKNIDISNNNFEWENLSPTECQRGSINLVESYSLLSSKKSNIHSCLKKNFPCSTDKPRRYSMRINCGGSEANVSGSIYEADIERKGASMLFITNGWALSSTGGFMDNDIDSDPYTVTNTSKLNVSMINSKLYTTARVSPLSLTYYGLCMINGIYTVKLHFAEIIFINDRSFNSLGKRIFDVYIQGNLVLRDFDIEREAGGTGKPIVKKFNATVTQNTLKIQFYWAGKGTTGIPTRGVYGPSVSAISVDPNFKPPLEHDDNNNNRTYVILLTVGIVSGVLVVVLIMLAIMRRKGLLGGKDPVYKELQGIDLQTGLFTLKQIKVATKNFDAENKLGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMLSGLQHPNLVKLHGCCVEGNQLILIYEYMENNCLSRILFGKGSDRKTKLDWLTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKISDFGLAKLIEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETISGKSNTNYRPDDEFFYLLDWAYVLQERGSLLELVDPDMGSDYSTEEAIVMLNVALLCTNASPTLRPTMCQVVSMLEGWTDIQDLLSDPGYSAAGSSSKHKSIRSHFWENPSRSQSMSIPTIYTDSSGSHVETEESKSLVKINSVGSDK* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0338 1020 Gene3D Phosphorylase Kinase; domain 1 647 750 - -
Psa2g0338 1020 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515
Psa2g0338 1020 Gene3D Transferase(Phosphotransferase) domain 1 751 959 - -
Psa2g0338 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 289 345 - -
Psa2g0338 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 382 990 - -
Psa2g0338 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 289 - -
Psa2g0338 1020 SMART serkin_6 675 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0338 1020 Pfam Malectin domain 409 593 IPR021720 -
Psa2g0338 1020 Gene3D - 406 597 - -
Psa2g0338 1020 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 80 289 - -
Psa2g0338 1020 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 345 - -
Psa2g0338 1020 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 990 - -
Psa2g0338 1020 Pfam Protein tyrosine and serine/threonine kinase 677 946 IPR001245 GO:0004672|GO:0006468
Psa2g0338 1020 ProSiteProfiles Protein kinase domain profile. 675 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0338 1020 Gene3D Ribonuclease Inhibitor 266 375 IPR032675 -
Psa2g0338 1020 Gene3D Ribonuclease Inhibitor 191 265 IPR032675 -
Psa2g0338 1020 Gene3D Ribonuclease Inhibitor 27 190 IPR032675 -
Psa2g0338 1020 SUPERFAMILY L domain-like 85 363 - -
Psa2g0338 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Psa2g0338 1020 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Psa2g0338 1020 SUPERFAMILY Protein kinase-like (PK-like) 660 949 IPR011009 -
Psa2g0338 1020 CDD STKc_IRAK 681 949 - -
Psa2g0338 1020 MobiDBLite consensus disorder prediction 981 1020 - -
Psa2g0338 1020 MobiDBLite consensus disorder prediction 981 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0338 Psa-Chr2 13119500 13127272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0338 209 1011 Receptor kinase-like Gene Family AT1G07650 62.776 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa2g0338 PK_Tyr_Ser-Thr 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0338 - - gmx:100784864 1627.84