Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0325 ATGAGTTTCTTTGCATGTTGTAAATCACAAGATAAGAATGAAAACAACTCATTGAAGGATAGTGTTAAGGATTATCGTATCATGTGTTTTAAATATGGTAGTGCCAAAAGGAAGTATATGGTGGAAGGAATCAATAATGATGAAAAAGGAAATATTACCTCTAAGACATTTTCTTACAATGAGTTATGTGTTGCAACTAAGAATTTTCATGCAAGCAATATGGTTGGTGAGGGAGGCTTTGGGAGAGTTTACAAAGGACGCATCAAAAGCATAGACAATAAGGTCGTTGCGGTAAAGAAACTTAATAAGGATGGATTCCAAGGAAGTAGAGAGTTTCTTGCGGAGGTTATGATTTTGAGTTTTTTGCACCACTCTAACCTTGTCAATTTGGTAGGGTATTGTTCAGAAGGTGAACAAAAGATTTTGGTATATGAGTACATGGCAAATGGTTCTTTAGAAGATCACCTTTTTGAGTTACCGCAAAGCAAAAAGTCTTTGGATTGGGAGAAGAGTACTTGA 519 0.3565 MSFFACCKSQDKNENNSLKDSVKDYRIMCFKYGSAKRKYMVEGINNDEKGNITSKTFSYNELCVATKNFHASNMVGEGGFGRVYKGRIKSIDNKVVAVKKLNKDGFQGSREFLAEVMILSFLHHSNLVNLVGYCSEGEQKILVYEYMANGSLEDHLFELPQSKKSLDWEKST* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0325 172 ProSitePatterns Protein kinases ATP-binding region signature. 75 100 IPR017441 GO:0005524
Psa2g0325 172 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 169 - -
Psa2g0325 172 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Psa2g0325 172 PANTHER OS07G0668900 PROTEIN 1 169 - -
Psa2g0325 172 SUPERFAMILY Protein kinase-like (PK-like) 47 164 IPR011009 -
Psa2g0325 172 Pfam Protein tyrosine and serine/threonine kinase 71 159 IPR001245 GO:0004672|GO:0006468
Psa2g0325 172 ProSiteProfiles Protein kinase domain profile. 69 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0325 Psa-Chr2 12447328 12449778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0325 45 169 Glycoside Hydrolase AT3G07070 54.264 8.66e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Psa2g0325 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0325 - - gmx:100797557 241.506