Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0319 ATGGCAGACATTGCAGTGTCCATTATAGCTAAGCTTTCAGAATATTTGGTCGACCCTATATTAAACAATGCTCGTTACGTTTTCGGTTTCAACCAAATCGTTAGAGGTCTTTATGATCAAAAGGACGAGTTGATAGTAACCCAAAAGAGTGTGAAGGAGCGCATGAAGGAAGCCAGAAGGAAAACCGAAATAATCGAGGAAGCTGTAGAGAGGTGGATGAATGATGTTAATAATGTCTTAAAAGATGTAGAAAAGCTTGAAGAAAAAACTAAAGATAACAAAGGGTGTTACCGTGTACCTTTCCAATACTTTCTAGCAAAAGAAGCAGAGAATGCGACAAAGAGAATGAAGAATCTATATATCAGCTGCATATTTGAGCCATTTTCTAGGCGCACCGAGCTTCCTGGCATGAAATACTTTTCATCCAAAAACTTTGTGTATTCCAAGTCCACCGAGCATGCTTATAATAAACTCATGGAGGCATTGAAAGATGGAAAATGTAACATGATTGGATTTCATGGGATGGGAGGATCGGGTAAAACAACTTTGGTGAAAGAGGTTGGGAAGAAAGCCGAGGAGTTACAACTTTTCGACAAAGTTGTTATGGCTGTTGTCTCTCACAATCCAGAAGTGACGAATATCCAAGGTCAAATTGCAGACAGTTTGGATTTGATATTGAGGGAAGAGACGACAATTGGTAGAGCACAAAGACTTTCGACAAGCTTACAAGTTGAGAGGACTCTTGTGATCTTGGATGATGTGTGGGAGAATCTTGATTTTGAAGCCATAGGGATTCCACCATGTTGCACTGTCTTGCTAGCTACTCGCGGTCGAGATGTATGCGTGTCTATGAACTGTCAAATTACGGTTGAGTTGACTCTCTTGGATGAGGAGGAAGCCTGGACTTTGTTTAAAAGGTGTGCAGATATCATTGATGACTCACCATATGCCTTGAAGTTGAAGAATGTACCAAGGAAAATTGCTAAAAAGTGCAAAGGACTCCCAATTGCAATTGTGACTATGGCAAGTATGTTAAGAGGGAAGAAAGTTGAAGAATGGGAGTTAGCATTGCTTAGACTAGAGGAATCACAGGAACTTGATGTTGAAGAAGTGCTGAGTAGTTGTTATGCATGTATCAAGTTAAGCTATGACAATTTGACAAAGCAAGTTTCGAAGAATCTCTTTTTGTTGTGCTCGATGTTTCCAGAAGATTATGAGATCAATATGGAAGATTTGGTTAGGTACATAAAGGGACTCGGACCATCGGCCGGGACTATTGGAACAATGGAGAAAGTGAGGAGAGAGGTACAAGTGACCATGAACATCCTTAAGGATTCATATCTGTTGCAACCTTGTGGTAAACAAGAATTTGTGAAAATGCATGACTTAGTTCGGGATGCAGCATTATGGATTGCTTCAAAAGAAGGTAAAGCGATTAAGATACCGGCCAAAACATCGGTAGCAGTAGAAGAAAATGTAAAAGAGATCGCAGCGATGTCCTTATGGAGCATGGAAAATCTTCCTTCTATTGATCAATTGCAGTGTTCAGCACTCAAGACTCTTCTACTTCATTCCACAGATGAATCTTCTTTACAATTACCAAAAGAATATTTTGGAAAGATGCAAATGTTGGAAGTCTTGGGGATTACAAAATTTTACTACACATGGCGCAATCTGTATACGCTGCGCTACTTGAGTTCATCATTGTCTATCTTTGCCGTGCCACAATCGATGGAGAGATTATCTATGCTACGGACTCTTTGTCTAAGAGGATATGATTTAGGCGATATCTCTATACTGGCAAGCTTAACAAGACTTGAGATTCTCGATTTGCGCAGTTCATCTTTCGATGAGCTGCCACAAGGAATCACAACTTTGCAGAAACTAAGACTACTGGATATATACACTTGCCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGGAAGTGTACACAGCTAGAGGAATTGTATATATGGAGAGTTGAAGATGATTCTTTACCGATTATCTCTTTACCAAGGTTGCATAGATATGTAATTGTATGCGACAAGTTCAGGGAAAACTGTAGATTCCTCATCGATGCTTATCTAGAGGATCATGTGCCATCAAGAGCATTATGCATAGATCAGTTTGATGCCTCAGCTCTTATTCATGATTCATCTTCAATCAAAGATTTGTTTCTGAGATCGGAACATCTTTACATGGGACATCTTCGGGGAGGGTGCAAGAGCATCGTCCCACACATGGATCAAGGAGGCATGAATGAGACGATTGGACTAATACTCGAATCTTGTTCAGAAATAGAATGCCTTCTTGATACTACAAATACCAATTTGCCAGCATTCTTTGAGTTGGTTACGTTGAAGTTGATATGGATGAATGGTCTTAAACGAGTTTTCAATGATCCATCTTTCCAATGCCCTCTTGAAAAATTACAAGACCTGCAGATAGAGTATTGTACACAACTGAGTAGCATATCTTTTCCAGGATTCACCATATGTGGTACTCTTGATTCTCAAATTACAGTGGTGTCCATGTCGCCAAATTTGAAAGAGATAGAATGCAGAGAATGTCCTCGCTTATCAACCAACCTTATGTACAAGACTTTGCTCAGTTCAGATCAACAGAAAGGTCTCATGGCCACTGAGGAGAGAGTAGTCTTTCCTGATAGCGAAGAATCTGTCCTAGCCTTGGAATATCTTACCTTTGAGAATTCCATGGTAGAAGGTATTTTCCAAATGCAAGCTGCAAAACAAGGGCCATTAAATTCAAACTTATCTCATTTATGTTTAAAGCATTTACCCGAGTTGAGGCTTATTTGGAAGGGCCCAAAAGATGTTCTCGGCCTCCAGAAGCTCAAGAGTTTGGTGCTGGTTGGATGCAGAAACTTGGAAACCATCTTCTCTCCTACTATTGTTGGAATCCTATCTGAGCTGAGTGAACTTGTTGTAAGCAAGTGTGATAAGTTGGAACAAATCATTTGTTCGGATCGTTTAGCGCAAGATGGAAACTTACCTGTTTTTTCCAAATCAGTGTGCTTCCCTCTACTGTCCATTGTTCATGTCTTTCAGTGCAACAATTTGAAAAGCCTTTTCTCTCATTCATTGCCTTCTCCATTTCCTGAACTAGAATTTATTACTATAGAGGAGTGTTCTGAAATAGAACAGGTTTTCTTTTTCAATGAAGATGATAAAGGTCAACATGTGGCAGAAGAAAACAAACAGAATTTAGTGCTTCCAAAATTGCGCGAGGTGAAACTCGTACATTTGCCAAACATCACTGAATTTTCTAAAGGACCTTATAAACTGCAGCAAAATGTGAAACATTACACAGTGAGACACTGTCCCAAATATACTTGTGCTCGGTTGCAGGAAAAGACTCCATTTTCAGCCATACATTTACAAACAATTGGGGATGTTTGTGAAATGGGATTAGGATCTGGCTCAACTAGTACTTTTTCCGCCACTGCTGATATTAATCCTCAGATACAAGAGAGGGTGAGCAAGTTGGAAACAAACTTAGAATCTGAGAGACAAAGAAGAAGGCTGATGGAGTTAGATTTGCAGGTTGAGAGGGAAAGGCGAAAACTAATAGAACTGAAACTGGAAACTGAGCAAGAAAGACGACGAATAATGGAAGAAACAATGCTTTCTTTCTTTCATAAAATGCTTGGAAGGGTCCCTCAACAGTTTTCTCACCTTCTTTCTCAAACTCAATCGGCACAAAATGAAGAAAGTGAAGATCAGGACTTTCAAAATGTATCCATACAGTCCCTCTGA 3780 0.3968 MADIAVSIIAKLSEYLVDPILNNARYVFGFNQIVRGLYDQKDELIVTQKSVKERMKEARRKTEIIEEAVERWMNDVNNVLKDVEKLEEKTKDNKGCYRVPFQYFLAKEAENATKRMKNLYISCIFEPFSRRTELPGMKYFSSKNFVYSKSTEHAYNKLMEALKDGKCNMIGFHGMGGSGKTTLVKEVGKKAEELQLFDKVVMAVVSHNPEVTNIQGQIADSLDLILREETTIGRAQRLSTSLQVERTLVILDDVWENLDFEAIGIPPCCTVLLATRGRDVCVSMNCQITVELTLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCKGLPIAIVTMASMLRGKKVEEWELALLRLEESQELDVEEVLSSCYACIKLSYDNLTKQVSKNLFLLCSMFPEDYEINMEDLVRYIKGLGPSAGTIGTMEKVRREVQVTMNILKDSYLLQPCGKQEFVKMHDLVRDAALWIASKEGKAIKIPAKTSVAVEENVKEIAAMSLWSMENLPSIDQLQCSALKTLLLHSTDESSLQLPKEYFGKMQMLEVLGITKFYYTWRNLYTLRYLSSSLSIFAVPQSMERLSMLRTLCLRGYDLGDISILASLTRLEILDLRSSSFDELPQGITTLQKLRLLDIYTCRIKKNNPYEVIRKCTQLEELYIWRVEDDSLPIISLPRLHRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDQFDASALIHDSSSIKDLFLRSEHLYMGHLRGGCKSIVPHMDQGGMNETIGLILESCSEIECLLDTTNTNLPAFFELVTLKLIWMNGLKRVFNDPSFQCPLEKLQDLQIEYCTQLSSISFPGFTICGTLDSQITVVSMSPNLKEIECRECPRLSTNLMYKTLLSSDQQKGLMATEERVVFPDSEESVLALEYLTFENSMVEGIFQMQAAKQGPLNSNLSHLCLKHLPELRLIWKGPKDVLGLQKLKSLVLVGCRNLETIFSPTIVGILSELSELVVSKCDKLEQIICSDRLAQDGNLPVFSKSVCFPLLSIVHVFQCNNLKSLFSHSLPSPFPELEFITIEECSEIEQVFFFNEDDKGQHVAEENKQNLVLPKLREVKLVHLPNITEFSKGPYKLQQNVKHYTVRHCPKYTCARLQEKTPFSAIHLQTIGDVCEMGLGSGSTSTFSATADINPQIQERVSKLETNLESERQRRRLMELDLQVERERRKLIELKLETEQERRRIMEETMLSFFHKMLGRVPQQFSHLLSQTQSAQNEESEDQDFQNVSIQSL* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0319 1259 SUPERFAMILY L domain-like 459 1048 - -
Psa2g0319 1259 Gene3D - 140 291 IPR027417 -
Psa2g0319 1259 PRINTS Disease resistance protein signature 169 184 - -
Psa2g0319 1259 PRINTS Disease resistance protein signature 241 255 - -
Psa2g0319 1259 PRINTS Disease resistance protein signature 331 345 - -
Psa2g0319 1259 PRINTS Disease resistance protein signature 948 964 - -
Psa2g0319 1259 Pfam NB-ARC domain 151 385 IPR002182 GO:0043531
Psa2g0319 1259 Gene3D - 382 469 IPR036388 -
Psa2g0319 1259 PANTHER - 780 999 - -
Psa2g0319 1259 PANTHER - 5 659 - -
Psa2g0319 1259 Gene3D Ribonuclease Inhibitor 882 1057 IPR032675 -
Psa2g0319 1259 Coils Coil 41 89 - -
Psa2g0319 1259 Gene3D Ribonuclease Inhibitor 492 880 IPR032675 -
Psa2g0319 1259 MobiDBLite consensus disorder prediction 1239 1259 - -
Psa2g0319 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 398 IPR027417 -
Psa2g0319 1259 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 780 999 - -
Psa2g0319 1259 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 5 659 - -
Psa2g0319 1259 Gene3D - 294 381 IPR042197 -
Psa2g0319 1259 Coils Coil 1160 1210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0319 Psa-Chr2 12346296 12362211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0319 155 480 WRKY Transcription Factor Family AT5G45050 27.429 1.97e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0319 - - mtr:MTR_5g092190 1467.6