Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0279 ATGCCCTCAGCTCAAGATCCATTTTACGTTGTCAAGGAAGATATTCAAGATTCTATTGATAGGTTGCAATCTAATTTCCACCAATGGGAAAATACTTTGGATACTGGGGAGCATTTGAACCTTTCAAAGGAAGTTCTTGCTGCTTGTGGAAGTATTGAGTGGCAGGTGGACGAATTGGACAAAGCAATTTCTGTAGCATCTAGGGATCCTTCTTGGTATGGCATTGATGAAAAGGAGATTGAAAACCGGAGGAGGTGGACCAGCAATGCTCGCACGCAGGTGCGCACAGTTAAGAAAACAGTGGAAGCTAGAAAGGGATCAAATACAACAACTCATGCTAATATGAATGGTATGCACAGGGAGTTAATGAGGCAACCTGATTCTCATCAAAGCACATCCAAGTCCAACCAATATGCTGCTGGGAGTGATGATGATTTCATAGAATCAGAGTCAGATAGGCAAATGCTTCTTATAAAGTACCTTTTCTTCATCTTTCTTTCATGTGCCTTTGAATTAAGTATTTTGTCTTTTTTCCTACCTCGACTTTGTGCACATGTCCATGATATCAAACTCCAATATGGACGCTTTTCTGCATGA 597 0.4087 MPSAQDPFYVVKEDIQDSIDRLQSNFHQWENTLDTGEHLNLSKEVLAACGSIEWQVDELDKAISVASRDPSWYGIDEKEIENRRRWTSNARTQVRTVKKTVEARKGSNTTTHANMNGMHRELMRQPDSHQSTSKSNQYAAGSDDDFIESESDRQMLLIKYLFFIFLSCAFELSILSFFLPRLCAHVHDIKLQYGRFSA* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0279 198 Coils Coil 12 32 - -
Psa2g0279 198 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Psa2g0279 198 PANTHER SYNTAXIN 1 159 IPR045242 -
Psa2g0279 198 Gene3D - 2 105 - -
Psa2g0279 198 PANTHER SYNTAXIN PROTEIN 1 159 - -
Psa2g0279 198 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0279 Psa-Chr2 10456560 10459472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0279 55 159 SNARE and Associated Proteins AT1G28490 61.905 2.17e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0279 K08500 - gmx:100793612 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4126 5 326644557 326648841 Psa2g0279 2 10456560 10459472 PCT