Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0269 ATGGAACCTCTTTCTTTCAAGGTTTTCACTCTCATTGCCTCTTCTGCATTTCACAAATTCATGAAAATTATGGAGACAATTTTCTTGGCTGTATTCATTTTTGTTGTAGCACTAGGAGGTTCAATAATAGGAACAATAGGAGGAGCTATCAAAGGACAAACTACAGAAATTGGTATTGTTGATGGAGCTTGCAGAGGAGCCATTGCAGGAGCCATTGCAGCCATAGAGTTCATGCCTTTTGCTTCTCTTGCTGAGCCTTTTTCCAAGGTAGCTTTGTTGACAAGTTTGTTAAATGGAAAAGTGTTCATGGAATGGATATGTCCAACTGTTGCACAAGCTTATATAAATTCAGTAGAAGCAACATATGGAGGAGTGGTTTCAGATATTAATGAGAGCATGGGAGTTAAAGGAATGTCACAAACTTGTATTATGAAACTTCCATTTCATACTTTTAACTCCTCCGACAAAATCATGAAACTATACAATGATTCATGCTGCTCCATTTGCTTCCAGGATTTAGAGGATGGAGAATTGGATTTAGAGGATGGAGAATTGGTGAGAATACTTTCAAAATGTTGTCACGTTTTTCATCTAGAATGCATTGACAAGTGGTTACTACAACAACGATCGTGTCCTATTTGTAGAACTTACGTTCTTGAATAG 663 0.3741 MEPLSFKVFTLIASSAFHKFMKIMETIFLAVFIFVVALGGSIIGTIGGAIKGQTTEIGIVDGACRGAIAGAIAAIEFMPFASLAEPFSKVALLTSLLNGKVFMEWICPTVAQAYINSVEATYGGVVSDINESMGVKGMSQTCIMKLPFHTFNSSDKIMKLYNDSCCSICFQDLEDGELDLEDGELVRILSKCCHVFHLECIDKWLLQQRSCPICRTYVLE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0269 220 SUPERFAMILY RING/U-box 159 218 - -
Psa2g0269 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 219 IPR013083 -
Psa2g0269 220 ProSiteProfiles Zinc finger RING-type profile. 166 215 IPR001841 -
Psa2g0269 220 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 9 218 IPR044523 -
Psa2g0269 220 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 218 - -
Psa2g0269 220 SMART ring_2 166 214 IPR001841 -
Psa2g0269 220 Pfam Ring finger domain 166 215 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0269 Psa-Chr2 10175925 10176992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0269 1 218 C3H Transcription Factor Family AT5G66070 32.051 9.47e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0269 - K19041 gmx:100305612 219.935