Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0268 ATGGGTATTTGTTTGAGTAAAAAAGAATCAGACCCAGATCAAAGACAGGTTGATTCTAGTCATCGCAATCCCAATCCTAATTCCAATCACAATCACAATCACAATTCCAATCACAATCATAATTCCAATCATAATCATAATCACAAGAATAATGAACCCCATGTGAATCAATCAAAACCAAAAGCCCCTTCTCAACATGCCTCAAGTACAAAACATGCTCATAGATCAGACACAAACACAATTCTAGGTAAACAATTTGAAGATGTGAAACAAGTTTACACAATTGGGAAAGAATTGGGGAGAGGACAATTTGGTGTGACTTATAGATGCACTCAGAATTCAACTGGTTTGAAATATGCTTGCAAATCGATTTCGAAGAGGAAACTTGTTAGTACAGCTGATAAGGAAGATATAAAGAGAGAGGTACAACTCATGCAACATATGAGTGGACAACCAAATATTGTTGAGTTTAAAGGTGCTTATGAGGATAGAAATTCAGTTCATGTTGTTATGGAACTCTGTGCTGGGGGCGAACTTTTCGATAGGATTATTGCGAAAGGACATTATAGCGAACGAGCCGCGTCTTCGATTTGTAGACAGATTGTTAATGTTGTTCAGATTTGTCATTTCATGGGTGTGATGCATAGAGATTTGAAGCCAGAGAATTTCTTGCTGTCTAGTAAGGATGATAAGGCAATTATCAAGGTTACTGATTTTGGCTTGTCGATTTTCATCGAAGAAGGAAAGGTATATCGAGATATAGTCGGTAGTGCATATTATGTTGCGCCAGAAGTTCTACGTCGTAGATATGGGAAGGAAGTAGATATATGGAGTGCAGGAGTTATATTGTATATCTTACTTTGTGGCGTGCCGCCGTTTTGGGCAGAGACGGAAAAGGGAATATTTGAGGCCATATTGCAAGGTCATATTGACTTTGAAAATCGTCCATGGCCAAGCATAACAAACAGTGCTAAGGACCTTGTTCGTAGGATGCTTATACAAGACCCGAAGAAACGCATCACTGCTACTCAGGTTCTAGAGCATCCATGGCTTAAAGAAGGTGGAAGTGCTTCTGATAAGCCTATAGACAGTGCAGTACTTTCTAGAATGAAGCAATTCAGAGCGATGAATAAACTAAAAAAACTCGCCCTCAAGGTAATTGCTGAAAATCTTTCTTCGGAAGAGATTCAAGGTTTGAAGGCAATGTTTACTAACATGGACACCGACAAAAGTGGTACGATCACATACGAGGAATTGAGAACAGGATTGCACAGACTCGGCTCAAAGCTTACCGAAGCTGAAGTTCGGCAGCTTATGGAAGCTGCTGATGTAGACGGAAATGGCACAATCGATTACATAGAATTCATCACTGCTACTATGCATCGACACAGGTTAGAAAGAGACGAACATCTTTACAAGGCCTTCAAGCATTTCGATAAAGACAATAGCGGTTTTATTACAAGAGATGAACTGGAAACAGCCATGAAGGAATACGGTATGGGCGACGCAGACACAATCAAGGAAATTATATCCGAAGTTGATACCGATAATGATGGTAGAATCAACTATGAAGAATTTTGTACAATGATGAGAAGTGGAGTTCATCAACAAGGCAAACTATTCTAA 1626 0.3936 MGICLSKKESDPDQRQVDSSHRNPNPNSNHNHNHNSNHNHNSNHNHNHKNNEPHVNQSKPKAPSQHASSTKHAHRSDTNTILGKQFEDVKQVYTIGKELGRGQFGVTYRCTQNSTGLKYACKSISKRKLVSTADKEDIKREVQLMQHMSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSERAASSICRQIVNVVQICHFMGVMHRDLKPENFLLSSKDDKAIIKVTDFGLSIFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGVILYILLCGVPPFWAETEKGIFEAILQGHIDFENRPWPSITNSAKDLVRRMLIQDPKKRITATQVLEHPWLKEGGSASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSSEEIQGLKAMFTNMDTDKSGTITYEELRTGLHRLGSKLTEAEVRQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFKHFDKDNSGFITRDELETAMKEYGMGDADTIKEIISEVDTDNDGRINYEEFCTMMRSGVHQQGKLF* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0268 541 CDD STKc_CAMK 92 350 - -
Psa2g0268 541 ProSiteProfiles Protein kinase domain profile. 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0268 541 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Psa2g0268 541 SUPERFAMILY EF-hand 390 530 IPR011992 -
Psa2g0268 541 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Psa2g0268 541 MobiDBLite consensus disorder prediction 1 35 - -
Psa2g0268 541 MobiDBLite consensus disorder prediction 56 82 - -
Psa2g0268 541 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 46 535 - -
Psa2g0268 541 Gene3D - 359 535 - -
Psa2g0268 541 Gene3D Transferase(Phosphotransferase) domain 1 179 358 - -
Psa2g0268 541 Pfam EF-hand domain pair 399 459 IPR002048 GO:0005509
Psa2g0268 541 Pfam EF-hand domain pair 469 531 IPR002048 GO:0005509
Psa2g0268 541 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Psa2g0268 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Psa2g0268 541 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Psa2g0268 541 CDD EFh 399 458 IPR002048 GO:0005509
Psa2g0268 541 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Psa2g0268 541 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Psa2g0268 541 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Psa2g0268 541 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Psa2g0268 541 Gene3D Phosphorylase Kinase; domain 1 94 178 - -
Psa2g0268 541 CDD EFh 473 531 IPR002048 GO:0005509
Psa2g0268 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 535 - -
Psa2g0268 541 SMART serkin_6 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0268 541 ProSiteProfiles EF-hand calcium-binding domain profile. 504 536 IPR002048 GO:0005509
Psa2g0268 541 MobiDBLite consensus disorder prediction 51 82 - -
Psa2g0268 541 MobiDBLite consensus disorder prediction 19 35 - -
Psa2g0268 541 SMART efh_1 505 533 IPR002048 GO:0005509
Psa2g0268 541 SMART efh_1 470 498 IPR002048 GO:0005509
Psa2g0268 541 SMART efh_1 434 462 IPR002048 GO:0005509
Psa2g0268 541 SMART efh_1 398 426 IPR002048 GO:0005509
Psa2g0268 541 SUPERFAMILY Protein kinase-like (PK-like) 93 358 IPR011009 -
Psa2g0268 541 Pfam Protein kinase domain 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0268 Psa-Chr2 10158845 10161659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0268 76 541 EF-hand Containing Proteins AT3G20410 81.197 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa2g0268 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0268 K13412 - gmx:100794852 853.588