Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0267 ATGGTTGATATTCAAATCCCAAGCACATTCGACCCGTTCGCGGAGGCCAAAGAATCAGATGCACCGGGTACAAAAGAGTATGTGCATATTCGCATACAGCAGCGGAATGGAAAGAAGAGCCTAACCACAGTTCAAGGGCTGAAGAAGGAGTTCAGCTATGAGAAGATCTTAAAGGATCTCAAGAAAGAGTTTTGTTGCAACGGAAACGTCGTCAACTGTAAGGATCTCGGCAAGATTATCCAACTCCAAGGCGATCAGCGCAAGAATGTTTCGCACTTTCTTGTTCATGCTGGTCTCGTCCGAAAGGATAACATCAAGATTCATGGTTTTTGA 333 0.4474 MVDIQIPSTFDPFAEAKESDAPGTKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVNCKDLGKIIQLQGDQRKNVSHFLVHAGLVRKDNIKIHGF* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0267 110 CDD eIF1_SUI1 26 109 IPR005874 GO:0003743
Psa2g0267 110 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 3 110 IPR005874 GO:0003743
Psa2g0267 110 PIRSF Transl_init_SUI1_Euk 1 110 IPR005874 GO:0003743
Psa2g0267 110 Pfam Translation initiation factor SUI1 25 98 IPR001950 GO:0003743|GO:0006413
Psa2g0267 110 Gene3D - 1 110 - -
Psa2g0267 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 2 110 - -
Psa2g0267 110 SUPERFAMILY eIF1-like 2 110 IPR036877 GO:0003743|GO:0006413
Psa2g0267 110 ProSiteProfiles Translation initiation factor SUI1 family profile. 28 98 IPR001950 GO:0003743|GO:0006413
Psa2g0267 110 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0267 Psa-Chr2 10157989 10158321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0267 2 110 Eukaryotic Initiation Factors Gene Family AT5G54940 80.734 1.25e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0267 K03113 - gmx:100791423 199.134