Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0234 ATGCTCGAAGAAGAAAAAAAAAGATTATCACCAACTATGACAATGTTTCTTCCAATACCAATGATGTTTCTTATAGTATTGTTTATGAGTTGTTTTTCTCTTGGAAGAGCTATAGATTGTGGTGGTAATAAAGTTGCAAACACCATCATTGTTGATCAAGGAGGAAAAGGAGCATTTAAAACGGTTCAAGCTGCCATTGATTCTGTAAAGAATCCAAATGATCAATGGGTTCTAATTAAAATAAATCCTGGTGTATACAAGGAAAAAGTTTTTATACACCCAAGAAAGCCATGCATTATTTTAAAAGGATTTGGTAATAATAGCACAATCATTACCTACAATGATGCAGCTAATGATATTGGCACTTCTAATAGTGCAACATTTCATTCATCTCCACCTAATGTAATTTTGAGTGGCATTACATTCAAGAACACACATGGATATGATGGACCAGCGGTAGCTGCTTCACTATATGGTGATAAGACTGCAATTTTTGAATGTAGTTTCACCGGCTATCAAGATACTTTGCTTTCATCAAAGAGGCGTCAATATTTTAAAAATTGTTATGTCGAAGGTGAAACGGACTTCATTTTTGGTGAAGGTCAATCTTATTTTGAGAATTGTAACATCAATGTTGTTCAAGCGGAATCCAAACCTATAGGTTTTGTCACCGCACAACGCAGAGATTCACCAAATAAGCCAAATGGTTATGTTTTTAAAGGAGGACGCATCGATGGAAATGGTCAAGTGAATCTAGGTAGACCTTGGGGTCCTTACTCGAGAGTTATATTTTGGGAAACATATTTCTCGTCCGTGGTAACTCCTCAAGGATGGGATCAATGGAATTTAACGACAATTCAAGCGCAAAATACTATCTTTGCAGAAGTAAATTGTACAGGACCAGGGGCCAATACTGAGAAACGTGTTGGGTGGGAGAAGAAAGCAAATAGCTTAAACTTAAATGAATATAGTTTGTCATCCTTCATAAATAAGGATGGATGGCTTGATAATTTACCATCAATATAA 1026 0.3577 MLEEEKKRLSPTMTMFLPIPMMFLIVLFMSCFSLGRAIDCGGNKVANTIIVDQGGKGAFKTVQAAIDSVKNPNDQWVLIKINPGVYKEKVFIHPRKPCIILKGFGNNSTIITYNDAANDIGTSNSATFHSSPPNVILSGITFKNTHGYDGPAVAASLYGDKTAIFECSFTGYQDTLLSSKRRQYFKNCYVEGETDFIFGEGQSYFENCNINVVQAESKPIGFVTAQRRDSPNKPNGYVFKGGRIDGNGQVNLGRPWGPYSRVIFWETYFSSVVTPQGWDQWNLTTIQAQNTIFAEVNCTGPGANTEKRVGWEKKANSLNLNEYSLSSFINKDGWLDNLPSI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0234 341 Gene3D - 42 339 IPR012334 -
Psa2g0234 341 PANTHER PECTINESTERASE 20 341 - -
Psa2g0234 341 SUPERFAMILY Pectin lyase-like 45 337 IPR011050 -
Psa2g0234 341 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Psa2g0234 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 341 - -
Psa2g0234 341 Pfam Pectinesterase 49 331 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0234 Psa-Chr2 9048040 9049733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0234 23 281 Carbohydrate Esterase AT2G19150 43.123 1.99e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0234 - - mtr:MTR_5g088290 401.749