Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0224 ATGATGCCGAGTGTGAACCCCGATTCATCCGACAAAGACTCTGAAGTATTCGCGGAAACTGATCCAACCGGTCGATACGGTAGGTACCCCGAACTATTAGGATGTGGTGCGGTGAAGAAAGTGTACCGAGGGTTTGATCAAGAAGAAGGAATTGAGGTAGCATGGAACCAAGTGAAACTAAGAAACTTCTGTGATGAGCCTGCTATGGTAAAGAGGCTTTATTCTGAAGTGAGGTTGTTGAGAAGCTTAACAAACGAAAACATCATTGAGCTGTATAGTGTTTGGACCGATGATGAACACGGCACACTCAATTTCATCACTGAGGTTTGTACTAGTGGGAATTTGAGAGAGTATAGGAAGAAACATAGGCATGTTTCAATGAAGGCGTTGAAGAAATGGTCAAGGCAGATTTTGAAAGGGTTGAATTATTTGCACACTCATGAGCCTTGCATCATTCATAGAGATCTCAATTGCAGTAATGTGTTTGTTAATGGGAATGTTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCCGCGGTTGTTGGGACAAATCACATTGCACACACAATTCTCGGCACACCAGAGTTTATGGCACCAGAGTTATATGATGAAGACTACACAGAATTGGTGGATATATACTCATTTGGAATGTGTTTGTTAGAAATGGTGACATTGGAGATTCCTTACAGCGAGTGCGACAATGTTGCCAAGATTTACAAGAAAGTGTCTTCTGGTATTAGACCTGCTGCCTTAAACAAGGTCAAAGATTCTGAGGTGAAGGACTTCATTGAAAAGTGTCTTGCTCAACCAAGGGTTAGGCCTTCTGCTGATGAGCTTCTCAAAGATCCTTTCTTTGACGAACTTGTTGACGACGACGATGACGAAAATGCTGATTATGTTGATTCATACTAA 912 0.4221 MMPSVNPDSSDKDSEVFAETDPTGRYGRYPELLGCGAVKKVYRGFDQEEGIEVAWNQVKLRNFCDEPAMVKRLYSEVRLLRSLTNENIIELYSVWTDDEHGTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSRQILKGLNYLHTHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAAVVGTNHIAHTILGTPEFMAPELYDEDYTELVDIYSFGMCLLEMVTLEIPYSECDNVAKIYKKVSSGIRPAALNKVKDSEVKDFIEKCLAQPRVRPSADELLKDPFFDELVDDDDDENADYVDSY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0224 303 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Psa2g0224 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 303 - -
Psa2g0224 303 MobiDBLite consensus disorder prediction 1 20 - -
Psa2g0224 303 SUPERFAMILY Protein kinase-like (PK-like) 23 290 IPR011009 -
Psa2g0224 303 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0224 303 CDD STKc_WNK 25 285 - -
Psa2g0224 303 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0224 303 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 303 - -
Psa2g0224 303 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0224 Psa-Chr2 8505163 8508008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0224 6 289 MAP Kinase Kinase Kinase AT5G55560 78.521 4.16e-175 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa2g0224 Pkinase 8.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0224 K08867 - pvy:116111266 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0224 2 8505163 8508008 Psa2g0224 2 8505163 8508008 ECH